Pseudomonas sp. Os17: POS17_1962
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Entry
POS17_1962 CDS
T04177
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psos
Pseudomonas sp. Os17
Pathway
psos00071
Fatty acid degradation
psos00280
Valine, leucine and isoleucine degradation
psos00310
Lysine degradation
psos00362
Benzoate degradation
psos00380
Tryptophan metabolism
psos00410
beta-Alanine metabolism
psos00640
Propanoate metabolism
psos00650
Butanoate metabolism
psos00907
Pinene, camphor and geraniol degradation
psos00930
Caprolactam degradation
psos01100
Metabolic pathways
psos01110
Biosynthesis of secondary metabolites
psos01120
Microbial metabolism in diverse environments
psos01200
Carbon metabolism
psos01212
Fatty acid metabolism
Module
psos_M00087
beta-Oxidation
psos_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
POS17_1962 (fadB)
00650 Butanoate metabolism
POS17_1962 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
POS17_1962 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
POS17_1962 (fadB)
00310 Lysine degradation
POS17_1962 (fadB)
00380 Tryptophan metabolism
POS17_1962 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
POS17_1962 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
POS17_1962 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
POS17_1962 (fadB)
00930 Caprolactam degradation
POS17_1962 (fadB)
Enzymes [BR:
psos01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
POS17_1962 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
POS17_1962 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
POS17_1962 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
POS17_1962 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BAQ73656
UniProt:
A0A0D6BFC9
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All DBs
Position
2149132..2151279
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMAASAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLKDAALALVKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KRKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQIVLAEVEAQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAQFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggctgttgacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagtttgtcgataacttcaagctg
ccggatgccgagctggtggctggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctcaatgtgccgaccgttgccgcgatcaatggcatcgccctggggggcggcctggaa
atgtgcctggcagcggattaccgcgtcatggccgccagcgccaagatcggtctgccggaa
gtcaagctgggcatctacccgggcttcggcggtactgtgcgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggatcgccgccggcaaggaaaaccgtgccgaagacgcgctg
aaagtcggtgccgtggatgctgtggttgcacccgagaaactcaaggatgccgctctggcc
ctggtcaagcgcgccatttccggcgagttcgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccattgagcagatgatggcgttcgaaaccgccaagggcttc
gtggctggccaggccggcccgaactacccggcaccggtcgaagcgatcaagaccatccag
aaagcggccaacttcggtcgcgacaaagccctggaagtggaagcagccggtttcgtcaaa
ctggccaagacttcggccgcacaaagcctgatcggtctgttcctcaacgaccaggaattg
aagagaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactc
ggcgccggcatcatggggggcggcatcgcctaccagtcggcgtccaaaggcacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcagggtctggcggaagccgcgaaactg
ctggtgggccgcgttgacaagggtcgcatgaccgccgcgaagatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggcgatttcggcaacgtcgacctggtggtcgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggccgaagtggaagctcaggtcaag
gaagacaccatcctggcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccgtatttcggcggcttcgccaagctggtcagcgccggtgtggat
ttcgtacgcatcgacaagatcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggtatcgacaccggccaccacggtcgcgacgtcatggctgaaggtttc
ccggatcgcatgaaggacgaccgccgctcggccgtggacgtgctttatgaggccaagcgc
ctgggacagaagaacggcaagggtttctacgcctacgaaaccgacaagaagggcaagcag
aagaaggttgccgatccatcggtactggaagtgctcaagccgattgtctacgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgaaaccgctgccgaagcggacatgggcctggtctac
ggcattggtttccctccattccgtggcggtgcgctgcgctacatcgattccatcggtgtt
gcccagttcgttgccctggccgaccagtacgccgatctgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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