KEGG   Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_4507
Entry
PSPPH_4507        CDS       T00266                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
psp  Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp00740  Riboflavin metabolism
psp01100  Metabolic pathways
psp01110  Biosynthesis of secondary metabolites
psp01240  Biosynthesis of cofactors
psp02024  Quorum sensing
Module
psp_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:psp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PSPPH_4507 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PSPPH_4507 (ribD)
Enzymes [BR:psp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PSPPH_4507 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PSPPH_4507 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam STAS
Other DBs
NCBI-ProteinID: AAZ34854
UniProt: Q48DB8
LinkDB
Position
complement(5140326..5141462)
AA seq 378 aa
MLTELAALDVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVH
ALRQAGELARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLR
LMNAGIGVQCGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGP
EARSAVQRLRAQSSVVLTGADTVLADKARLTVRPDELGLNAELTALAAARPPLRVLIDGR
LRVPLDAPFFQAGSALVVTCAAASARGRYQEEGHEMLALADSAGHVDLRKLMGELATRGV
NEVLVEAGPRLAGAFARLGLVDEFQIFIAGKFLGSSARPLLDLPLAQMSEALELNIVQMR
AVGNDWRVIALPVRAPGV
NT seq 1137 nt   +upstreamnt  +downstreamnt
ttgctgactgaactggcggctctcgacgttcattacatggcgcgtgcgctggagctggcg
cgtaacgggctctactccacgcaccccaacccgcgcgtcggctgcgttattgtgcgtgac
ggccagatcgtcggtgagggctggcatgtacgggctggcgagccgcatgccgaagtgcat
gccctgcgccaggccggcgaacttgccagaggcgcgaccgcctacgtcacccttgaaccg
tgcagccatcaggggcgcacgccgccctgtgccgatgcgctggtcaacgccgggctggcg
cgggtcgtcgcggccatgcaggaccccaaccctgaagtgtccggtcgtggcctgttgcgc
ctgatgaatgccggtatcggcgttcagtgcggcgtgctggaaagcgaagcgcgagcgctg
aacaaaggctttctcaagcgcatggaaaccggacagccctacatacgcgtgaagatggcc
atgagcctggatggccgaaccgctatggccagcggcgaaagccagtggatcaccggtccc
gaggcgcgttccgccgttcagcgtctgcgcgcgcagtcgagcgtagtgctgaccggagcc
gatacggtgctggccgacaaggcccgcctcaccgtgcgccccgatgagttgggtctcaat
gcagaattgaccgcgctggccgctgcgcgtccgcccctgcgggtattgattgacggtcgt
ctgcgcgtaccgctggacgcgccgttctttcaggcgggcagtgcgctggtcgtgacctgt
gctgcggcgtcggcgcgaggtcgctatcaggaagaaggccacgaaatgctggcactggct
gacagcgccggtcatgtggacctgcgcaagttgatgggcgaactggccacgcgtggtgtc
aatgaagtgctggtcgaagccggtccgcggctggcgggtgcctttgcgcgtctcgggctg
gtcgacgagtttcagatattcattgccggcaagtttctcggctcatcggcccggccgttg
ctcgacctgccgctggcgcagatgagcgaagcgctggagctgaacatcgtgcaaatgcgt
gccgtcggtaatgactggcgagtcatcgctctccctgtgcgcgcacccggcgtataa

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