Polyodon spathula (Mississippi paddlefish): 121298577
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Entry
121298577 CDS
T07273
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 1-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121298577
04147 Exosome [BR:
pspa04147
]
121298577
04090 CD molecules [BR:
pspa04090
]
121298577
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121298577
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121298577
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121298577
Exosomal proteins of bladder cancer cells
121298577
CD molecules [BR:
pspa04090
]
Proteins
121298577
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Antigens
121298577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_4
PKD
C2-set_2
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
121298577
NCBI-ProteinID:
XP_041081639
LinkDB
All DBs
Position
24:complement(18938497..18958374)
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AA seq
568 aa
AA seq
DB search
MGAHFINWIIISLWAGSSALIVTPVTDPVISKVGDNVTLEIKPPGILGSVTWTFSPTGIP
VVQWNGPVPVTGPGYENRVTLNTTTGSLELRSVQLSDAGEYIFEGITITSGRETFNGSVT
VKVYEPVSQPRVRSNVTNPVEFNDTVSLTCTASGSAVSYRWLNGSSVLSDSERIHLSDDN
KTLTIPRVLRSDDGTLYCYVFNPVTNSTSEPFHLIVSYGPESLTLSISPQKLIYSAGLDL
TLSCSAQSSPPAHYQWYFNGAPLNKLGSQLNMAHIQHSQTGNYTCWASNNITLRYADVTR
AIIVVESITNVNVKPNPAQPIANQTLNLTCEVLGSQTVSSRLWLKNNQPLSTSDRITLSV
DNSTVSFNPVLQSDNGTYQCKAENPVSEVTSVGYRLFNSSLAAGNKSLTAGQITGIVIGT
LVGVVLIGVGVYFSVKTFGNGTKTPKPSPPGPTTAANANDKADNIHYADPKFLKNNKSGQ
RIQMEQTTTEYAQVAGRRAGNQRRFLTCPSTSQPFRRLTPNPGPPKPSPSPSPSPSPNPG
RGHGVGDRLTEMNISTCVPRVKIKIHSL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgcactttataaactggattatcatatcactatgggcaggatcttcagctctg
atagtaacacctgtcacagaccctgtaatcagcaaggttggagacaatgtaacgctggag
attaaaccccctggaattctaggttcagtgacatggactttcagccctacagggatccct
gtggtgcagtggaacggacctgtcccagtcacaggcccgggatatgagaacagagtcacc
ctgaacacaactacagggtcactggagctcagatcagtgcagctcagcgacgctggagag
tatatattcgaaggcattaccattacatcaggaagagaaacattcaatggaagtgttacc
gtgaaagtttatgaacctgtctcccaacccagagtccgctccaatgtgactaatccagtg
gagttcaatgacactgtcagtttgacctgtacagcctctggttctgccgtctcataccga
tggctcaatggcagctctgtgcttagtgacagtgagcggattcacctgagtgatgacaat
aaaacactgaccattcccagggtgttgagatctgatgatgggaccctgtattgctatgtg
tttaaccctgtcactaacagcaccagcgagccgtttcatctcatcgtgagctatggacca
gaatccctcactctgtctatcagcccccaaaagctgatctatagtgcaggactagacctc
actctgtcctgctctgcacagtccagcccacctgctcactaccaatggtactttaatgga
gcccctcttaacaaactgggctcacagctgaatatggctcacattcagcacagtcagact
ggaaactatacctgctgggcctctaacaatataacccttaggtatgctgatgtaacaaga
gcgattattgttgtggagtcaataactaacgtaaatgtgaaacccaaccctgcccagcca
atagcaaaccagactctaaacctgacctgcgaggtgcttggatcacagactgtttcctca
aggctctggctgaagaacaatcagcccttgtccactagtgacagaataacattgtctgtg
gacaacagcacagtctccttcaatccagtgctgcagtctgataacggcacatatcagtgt
aaagctgagaaccctgtaagtgaagtgacgagtgttggatacagattgttcaattcttct
ctggcagctggaaataagtccttgacagcagggcagattacaggaatcgtcattggcaca
cttgtaggggttgtccttattggtgttggagtgtacttttccgtgaaaacatttgggaat
ggcacaaaaactcctaaaccaagtcctccaggccctactacagccgctaatgcaaatgat
aaggcagacaacattcactacgctgaccccaaatttctaaaaaacaataaaagtggtcaa
aggatacagatggaacagaccactactgaatacgcccaagtggcaggccggcgcgctgga
aaccagagaaggtttcttacctgtccgtcaacatcccagcccttcagacgcctcacccca
aacccgggcccacccaaacccagccccagccccagtcccagtcccagccccaaccccggc
cggggtcatggggttggggataggctaacagagatgaacatttccacctgtgtcccccgc
gtgaaaatcaaaatccattccctatag
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