Polyodon spathula (Mississippi paddlefish): 121298578
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Entry
121298578 CDS
T07273
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 1-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121298578
04147 Exosome [BR:
pspa04147
]
121298578
04090 CD molecules [BR:
pspa04090
]
121298578
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121298578
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121298578
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121298578
Exosomal proteins of bladder cancer cells
121298578
CD molecules [BR:
pspa04090
]
Proteins
121298578
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Antigens
121298578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_4
Ig_5
PKD
C2-set_2
BiPBP_C
V-set_CD47
Podoplanin
Motif
Other DBs
NCBI-GeneID:
121298578
NCBI-ProteinID:
XP_041081640
LinkDB
All DBs
Position
24:complement(18978222..18991739)
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AA seq
611 aa
AA seq
DB search
MCLCHAPSPSESADLFLEKQSAGCSALELKPVTDPVISEVGGNVQLQIKPPGVVAAVAWF
FSPAVIPVASWTGSAPVISPGYVNRVTLNTATGSLELRSVQLNDTGVYAFQGNIVASETV
ESFNGNVNLGVYAPVSQPTVRSNVTNPVEFNDTVSLTCTASDSAVSYRWLNGSSVLSDSE
RIHLSDDNKTLTIPRVLRSDDGTLHCYVFNPVTNSTSEPFHLIVSYGPESLNMSISPQKL
IYSAGSDLTLSCSAQSSPPAHYQWFFNGAPLNKLGSQLNMAHIQHSQTGNYTCWASNNIT
LRYADVTRAIIVVEPITNVNVKPSLAQPIANQALNLTCEVLGSQSVSSRLWLKDGQPLST
SDRITLSVDNIVVSFNPVLQSDNGDYQCKASNPLSGVTSAGYRLEVNYGPEQVSITGPDS
AVLNSSVTFTCSAQSIPPCNYTWYFNEKEAAQGSQYKIASVSSADRGSYTCVARNSVTGR
NSSAVKEFNVTDEKPLTAGQIAGIVIGTLVGVVLIGVGVYFSVKTFGNGTKTPKPSPPGP
TTAANANDKADNIHYADPKFLKNNKSGQRIQMEQTTTEYAQVAGRRAGNQKQPPLEPNTE
YAQIQKNGPAV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctgtgtcatgctccctcccccagtgaatcagctgatctcttcctggagaagcag
agtgctggttgttcagctttggaactaaaacctgtcacagaccctgtaatcagcgaggtt
ggaggcaatgtacagctgcagattaaaccccctggagttgtagctgcagtggcctggttt
tttagccctgcagtgatccctgtggcgtcatggactggatcagccccagtcatatccccg
ggatatgtgaacagagtcaccctgaacacagctacagggtcactggagctcagatcagtg
cagctcaatgacactggagtgtatgcatttcagggcaatatcgttgcatcagaaactgta
gaatcattcaatggaaatgttaacttgggagtctatgcacctgtctcccaacccacagtc
cgctccaatgtgactaatccagtggagttcaatgacactgtcagtttgacctgtacagcc
tctgactctgccgtctcataccgatggctcaatggcagctctgtgcttagtgacagtgag
cggattcacctgagtgatgacaataaaacactgaccatacccagggtgttgagatctgat
gatggaaccctgcattgctatgtgtttaaccctgtcactaacagcaccagcgagccgttt
catctcatcgtgagctatggaccagaatccctaaatatgtctatcagcccccaaaagctg
atctatagtgcaggatcagacctcactctgtcctgctctgcacagtccagcccacctgct
cactaccaatggttctttaatggagcccctcttaacaaactgggctcacagctgaatatg
gctcacattcagcacagtcagactggaaactatacctgctgggcctctaacaacataacc
cttaggtatgctgatgtaacaagagcgattattgttgtggagccaataactaatgtaaat
gtgaaacccagccttgcacagccaatagcaaaccaggctctaaacctgacctgcgaggtg
cttggatcacagagtgtttcctcaaggctctggctgaaggacggtcagcccttgtccact
agtgacagaataacattgtctgtggacaacattgtagtctccttcaacccagtgctgcag
tctgataatggagactatcagtgtaaagctagtaaccctttaagtggagtgacgagtgct
ggatacagattggaggtcaattatggaccagagcaggtatctattacaggaccagactca
gcagttctcaattcctccgtaacattcacatgttcggctcagtctatccccccttgtaat
tacacctggtatttcaatgagaaagaggctgcccagggctcacagtacaagatcgcttct
gtaagcagtgctgataggggaagttacacctgtgtagcccggaactcagtgactggaaga
aacagttctgcagtaaaggaatttaatgtgactgatgaaaagcccttgacagcagggcag
attgcaggaatcgtcattggcacacttgtaggggttgtccttattggtgttggagtgtac
ttttccgtgaaaacatttgggaatggcacaaaaactcctaaaccaagtcctccaggccct
actacagccgctaatgcaaatgataaggcagacaacattcactacgctgaccccaaattt
ctaaaaaacaataaaagtggtcaaaggatacagatggaacagaccactactgaatacgcc
caagtggcaggccggcgcgctggaaaccagaagcaacccccattagaaccaaacactgaa
tacgcacagatccaaaagaatggaccagcagtgtag
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