Polyodon spathula (Mississippi paddlefish): 121299629
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Entry
121299629 CDS
T07273
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121299629
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121299629
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Motif
Pfam:
SNF
NADH_dh_m_C1
Motif
Other DBs
NCBI-GeneID:
121299629
NCBI-ProteinID:
XP_041083411
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Position
25:complement(20389567..20404977)
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AA seq
590 aa
AA seq
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MSHQDSSAPTGSLVSQGTTNGGYSSNTVPMITQRDSRDSWSKKMDFLLSVIGFAVDLGNV
WRFPYICYQNGGGAFLIPYTLMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGIG
FAICIISLYVSFYYNTIIAWALYYFYSSFTSTLPWTSCDNVWNTPNCTNYFGTNNVSWNN
YSHSPAEEFYTRNVLEIHKSSGLRGVGGLRWQLVLCLFLIFTIVYFSLWKGVKTSGKVVW
VTATLPYVVLFILLIRGATLPGAWRGVVFYLKPKWEKLLETRVWVDAAAQIFFSLGPGFG
VLLALASYNPFTNNCYRDAIVTSLVNCMTSFLSGFVIFTVLGYMAEMRNVEVEDVAKDKG
PSLLFITYPEAIANMVGSTFFAIIFFMMVIALGLDSTFGGLEAIITAVMDEYPQHLFKRR
ELFVLGLVIVCFMGSLSTLTHGGAYVVQLLETFGAGCSIIAVVFLEAIAVSWFYGIQRFS
NDVKAMLGFAPGIFWKVCWVAISPAFLAYIIVSSLLDRHPLILFDYKYPDWSTTVGFIVG
ASSFIWIPVYMVYKLVWTPGSLKQRLAVCMRPERTMRDPHTDSLSMTPVP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccaagactcctctgctcccaccggtagcctggtcagccagggcaccactaac
ggcggttacagctccaacacggtgccgatgatcacccaaagagattccagggatagctgg
agcaaaaagatggattttctcttgtctgtaattggttttgcggtggatctaggcaacgtg
tggaggtttccttatatctgttatcaaaacggaggtggtgctttcctcatcccctacacc
ctgatggctatcttcgggggggtccccctcttctatatggagcttgcattggggcagttt
cacaggactggagccatctccatctggaaacacatctgccccatttttaaagggatcgga
ttcgctatctgcatcatctctttgtacgtgtccttctattacaacaccatcatcgcctgg
gcactgtactatttctactcatccttcactagcacgctgccctggaccagctgcgacaac
gtctggaacacgcccaactgcaccaactacttcggcaccaacaacgtctcctggaacaac
tactcccactccccagccgaggagttttatacgaggaatgtgctggagatccacaagtca
tcagggctgcgcggagtgggggggctgcgctggcagctcgtgctctgcctcttcctcatc
ttcaccatcgtctacttcagcctgtggaagggagtcaagacatcagggaaggtggtgtgg
gtaacagcgaccctgccctacgtggtgctcttcatcctgctgattcgtggagccaccctg
cctggcgcttggaggggcgtcgtcttctacctcaaacccaaatgggagaagctgcttgag
accagggtatgggtggatgcagcagcccagattttcttctctttgggtcccggcttcgga
gtgctccttgccttggcgagctataacccgttcaccaacaactgctaccgagatgccatc
gtgaccagtctggtaaactgcatgaccagtttcctgtcaggctttgtgatcttcacggta
ttggggtacatggcagaaatgaggaacgtggaagttgaggacgtggcaaaagacaaaggt
cccagtctcctgttcatcacctaccctgaggccattgctaacatggtgggctccacgttc
tttgccatcatattcttcatgatggtgatcgccctgggactagacagcacgttcgggggt
ctggaggctattatcacggctgtgatggatgaatatcctcagcacctgttcaagcggcgg
gagctgttcgtgctggggctggtgatcgtgtgcttcatgggctcgctcagcacccttacc
catgggggtgcctatgtggtccagctgctcgagacgtttggagcgggctgttcaatcatt
gcagtggttttcttggaagccatcgctgtgtcgtggttctatggtatccagcgattcagt
aatgatgtcaaagccatgctgggctttgctccgggaatcttctggaaagtgtgctgggtg
gctatcagccctgccttcttagcatatataatagtgagctccctgttggatcggcaccct
ctcatactgtttgactacaagtaccctgactggagcaccacagtggggttcatcgttggg
gcttcttccttcatctggatcccagtttacatggtctacaagctggtgtggacccccggc
tcactcaagcagcgcttggcggtgtgtatgcgtcctgagaggacaatgagagacccgcac
actgattcgctcagcatgactcccgtcccctaa
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