Polyodon spathula (Mississippi paddlefish): 121301054
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Entry
121301054 CDS
T07273
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121301054
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121301054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121301054
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Glutamate (ionotropic)
121301054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
121301054
NCBI-ProteinID:
XP_041086085
LinkDB
All DBs
Position
26:complement(15847520..15924867)
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AA seq
1476 aa
AA seq
DB search
MWEGDAGMKLTNMGNFGLLLLALPALLAQYSPARGAEKSYPVLNIAVILGRNHYIIERDI
RGLWEKDMVPEVTLDVNVVTVLVNQTDPKSIITHICDLMSGTKIHGVVFGDDTDQEAVAQ
ILDFISSQTFIPILGIHGGSSMIMADKDQMSTFFQFGASIQQEALLMLNIMKEYDWHVFS
VVTSKFPGYQDFLTIIKTTVDNSFLGWDLQNMITLDAVAGDMKTQIQLKKIHSNVVLLYC
SKDEASYILEEARSLGLTGYGFVWIVPSLSTGNTEITPDEFPSGMISVSYDDWDYPLEAR
VRDGLGIITSAAAAMLDQYSFIPEAKTSCYGQLEQNELPSNALHKFMMNVTWNGRDLSFT
EDGYQANPKLVVIVLNKDRVWEKVGRWENNSLSLKYPVWPRYNSFGDAEADDNHLSIVTL
EEAPFVIVENVDALTGTCMRNSVPCRKHIKQDNTTNEGTYVKKCCKGFCIDILKKIAKAV
KFTYDLYLVMNGKHGKKINNVWNGMVGEVVNKRAVMAVGSLTINEERSEVIDFSVPFVET
GISVMVPRSNGTVSPSAFLEPFSASVWVMMFVMLLIVTAMAVFIFEYVSPMGFNRNLAQG
RDPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTASKIMVSVWAFFAVIFLASYTANLAA
FMIQEEFVDQVTGLSDNKFQRPYDYSPPFRFGTVPNGSTERNIRNNYPDMHQYMVKYHQR
GVQDALVSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYVFATTGYGIALQKGSYW
KRQVDLALLALVGDGEMEELEAQWLTGICHHEKNEVMSSQLDIDNMAGVFYMLAAAMALS
LITFIWEHLFYWKLRFCFTGVCDGTPGFLFSISRGIWSCIHGVHIEEKKKSSDLDFSSPQ
ANMLKLIKSAKNMTNMTNLSSSRISSPKRTSDFTHRGSLMMDMVGDKGNFHFADNRSYPA
KEALYPDNVSDLQPFMGNRHQDILNNYIFQSQHPLTLNESNPNTVEVAVSAETAPANPKP
RQLWKKSVETLRQNPGPVQESLPVDPRHSIKSQRYLPEEAAHSDVSECSSRAVSYKDPDN
NQKHHKPKDNLKKRSMTSKYPRDCSEVELSYLKNKQSGSTREKIYTIDAERELGLHGDQH
LYRENRLPEDLEYPSEMYQDHNDNYRKQEPIIHLNSSPLHPQEIIPNNENKYSLYNKHYS
LNVSPHETNDRYKQTHCRSCLSKVPNYSGHFAVRSPYNRCEACVHMGNLYDIREDQMLQE
SLNPMLQESLNPMLQDEMFGQHWPQTDGPQVQKRNRLRLSRQHSFDNLLEKPREIDLGRP
ARSVSLKEKDRLLEDNPYANMFNLKPDKLFDSKPTFFNHNLEESKRSKSLYPDRSSENPF
LHPFQDQRLFHGRSFYDIYRQSAPARLRNDNNFRSSVKSTASYCSRDGRIPNDMYISEHV
MPYVANKTSAYSTPRVLNSCSNRCVYKKIPSIESDV
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaggagatgctgggatgaagctgaccaacatggggaatttcggcttgctgctt
ttggcgcttccagctcttctggcccagtacagcccggctcgcggagcggagaagtcctac
cccgtcctgaacattgctgttattttagggcggaaccactacatcatagagagggacatc
cggggcctgtgggagaaggacatggtccccgaggtgacccttgatgtcaatgtggtcact
gtcctggtcaaccagaccgacccgaaaagcatcataactcacatctgtgacctgatgtct
ggaaccaaaatccatggggtggtttttggggacgacacagaccaggaagcggttgctcag
attttggattttatttcgtcccagactttcatacccatcctgggaatccatggagggtcc
tccatgatcatggcagacaaggatcagatgtccacgttcttccagttcggggcttctatt
cagcaggaagccctcctgatgctaaacatcatgaaggagtacgactggcacgtgttctct
gtagtgaccagcaagttcccggggtatcaggatttcctcaccatcataaagaccacggtg
gacaacagcttcttagggtgggatttacagaacatgatcactctggatgccgtggccggg
gatatgaagacccagatccagctgaagaagatccattccaacgtggtcctgctgtactgc
tcgaaggacgaagcgagctacatcctggaggaggctcgctcgttgggcttgacgggatac
ggcttcgtctggattgtccccagcttgagcacgggcaacaccgagatcactcccgacgag
ttcccgtccgggatgatttcggtttcgtacgacgactgggactaccccctggaagccagg
gtgcgggacggcctggggattataaccagcgctgccgctgccatgctggatcaatacagc
ttcattccggaggcgaagaccagctgctacggacaactagagcaaaacgaactgccttcc
aacgctttgcacaaatttatgatgaatgtgacctggaatggcagagacttgtccttcaca
gaagatggctatcaagcaaaccccaagctagttgtcatagttttgaacaaggatagggtt
tgggagaaggtggggcgctgggagaataatagcctgtctctgaagtaccctgtgtggccc
cgatacaactccttcggggacgcagaggccgatgacaaccacctgagcatcgtcaccttg
gaggaggcacccttcgtcatcgtggagaacgtggacgcgctcactgggacctgcatgagg
aactccgtgccctgccggaagcacatcaagcaggacaacacaacgaacgaagggacctac
gttaagaaatgctgcaaaggattctgcatcgacatcctgaagaagatcgccaaggctgtg
aagttcacctatgacctttacttggtgatgaatgggaagcatggtaaaaagatcaataat
gtgtggaatggaatggttggtgaagtggtcaacaagcgcgctgtcatggctgtggggtct
ctcacgatcaacgaagagcgctctgaggtcatcgacttctcggtccctttcgttgaaacc
gggataagcgtcatggtgccaagaagtaatgggacggtttccccatctgcttttctagaa
cccttcagtgcttcggtgtgggtgatgatgttcgtcatgctgctcattgtcacagccatg
gctgtctttatatttgagtacgtcagcccaatgggcttcaacaggaatctagcgcaaggc
agagacccccacggcccatcgttcaccattggaaaagcgatatggctgctctgggggctg
gtatttaataactctgtgccggtgcagaaccccaaaggaaccgccagtaaaatcatggtt
tcggtctgggctttctttgctgtcatctttctggccagctacactgctaacctggcagcc
ttcatgatccaagaggagtttgttgaccaggtgactgggctcagtgacaataagtttcag
agaccctatgactactctcctcccttccggtttggtactgttcccaatggaagcaccgaa
aggaacattcgaaacaactaccctgacatgcaccagtacatggtgaagtatcaccagaga
ggcgtgcaggacgctctggtcagcctcaagacaggaaagctggatgcattcatatatgat
gcggctgttttaaactacatggccgggagagacgagggctgtaagctggttaccattggc
agcggctatgtctttgcaaccacgggctatgggatcgctctgcagaagggctcatactgg
aaacggcaggtggatctagctctgctggccctggttggagacggtgagatggaggagctg
gaggcccaatggctgactggcatctgccaccatgagaagaacgaagtgatgagcagccag
ctggacattgacaacatggccggggtcttctacatgctcgctgcggccatggccctcagc
ctcatcaccttcatctgggagcacctgttttactggaagctccgattctgcttcacagga
gtctgcgatggaacgcctgggttcctgttctcaataagcagaggaatttggagctgtatt
catggtgttcatattgaagaaaagaaaaagtcctctgacttagacttcagcagtccacaa
gccaacatgttgaagttaattaagtcagccaaaaacatgaccaacatgacaaacctgagc
tcatcaaggatcagttctcccaagcgaacctccgacttcactcacagagggtccctgatg
atggacatggtgggtgacaaaggaaacttccactttgctgacaaccggagctaccctgca
aaagaggctctctaccctgacaacgtgagtgacctgcagccgtttatgggaaatcgccac
caagacatcctaaacaactacatctttcagagccagcaccccctgactctgaacgagtcc
aatcccaacactgtggaggtggccgtcagcgccgagaccgccccagccaaccccaaaccc
cggcagctttggaagaagtctgtggaaacgttgcggcaaaatccggggcccgtgcaagag
tccctcccggtcgacccgaggcattctattaaaagccagcggtacctcccagaagaggca
gctcattctgatgtgtctgaatgctcgagcagagctgtttcctacaaggacccagataac
aaccagaagcaccacaaacccaaggacaatttaaaaaaaagatcgatgacatcaaaatac
cctagggactgcagcgaagtggagctgtcctacttaaagaataagcagagcggctccaca
cgcgaaaagatttacaccatagatgctgaaagggagctgggtttgcatggagaccagcac
ctttatagggaaaataggctgccggaggacttagagtacccctccgaaatgtatcaagat
cacaacgacaactacaggaaacaagaacccatcatccatctcaacagcagcccccttcac
ccccaagagatcatccccaacaacgaaaacaagtacagtctgtacaacaagcactacagc
ttgaacgtcagcccacacgagacaaacgataggtacaaacagactcactgccggagctgt
ctttccaaggtgccaaattactctgggcattttgctgtcaggtctccttacaaccgctgc
gaggcctgcgtgcacatggggaacttgtatgacatcagagaagatcaaatgctgcaggaa
tcgctgaaccccatgctgcaggaatcactgaatcccatgctgcaagacgaaatgtttggc
cagcactggccccagactgatgggccacaggtacagaagaggaatagactgaggctgagc
aggcagcattcctttgacaatctcctggagaaacccagggagatagacctgggaaggccg
gcgcggagcgtgagcttgaaggagaaggacaggcttctcgaggacaacccttatgcaaac
atgtttaatctcaaaccagacaagctgttcgacagcaagcccaccttcttcaaccacaac
ctggaggagagcaaacgcagtaagtccctttatcccgatcgcagctcagagaaccctttc
ctccaccctttccaagaccagcgcttgttccatggcagaagcttttatgacatttataga
caatcggcccctgccaggttgaggaatgacaacaactttaggtcttcggtgaagtcgaca
gcctcatactgttctcgggatggtcgaatacctaatgacatgtacatttcagagcatgtt
atgccttatgtagcaaataagactagcgcatactccactcccagggttctgaattcttgc
agcaatagatgtgtgtacaagaaaattcctagtattgagtcagatgtttaa
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