Polyodon spathula (Mississippi paddlefish): 121302484
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Entry
121302484 CDS
T07273
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121302484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121302484
03036 Chromosome and associated proteins [BR:
pspa03036
]
121302484
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
121302484
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121302484
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121302484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
121302484
NCBI-ProteinID:
XP_041088429
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All DBs
Position
2:complement(84336342..84375445)
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AA seq
556 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPVYIQHWQQLFPQSQLKTGALSQLQPHERADLPVESLRQHPTSI
SSSSASTPSSSSCSSSSLAGLTQLSVPQIALFGHSQCPEIPTSVLGGQSKELYSFSQCKN
DRGPRIKFTPEELDYYLYGQQRMEIIPLNNHTSDPNNRCDMCVDNRNGECPMHGPLHSLR
RLVGTSSSAASVPPPEIPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIGPFQGV
PLLLDKPKPGVGRNSRHLWEIYDQEGTLQHFIDGSEPSKSSWMRYIRCARHCGEQNMMVV
QYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPASVMEVMSRQET
LQPSFTKTSKGPSSVLLRSMVFPHTSCTRSFSLLDKPGQVESGFNQMNGKNQRVLVSPTS
TSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNH
VVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQATQLSRHQRMP
NECKPIMESTESIEVD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggtgaccccagcggatctgctttcttgaaggtagatccagtctacatt
cagcactggcagcagcttttcccgcaaagccaactaaagaccggagccctgagtcagctg
cagccccacgagagagcagatctcccggtagaaagtctccgccagcacccgacttccatc
tcctcctcctccgcctcaaccccatcatcgtcatcctgctcatcctcctcgttagcaggg
ttaacccagttgtctgtgccccagattgcactttttggacactcgcagtgccccgaaatc
cccacatcggtactcggcggtcaaagcaaagagctgtattcattttcccagtgtaaaaac
gacagaggaccaagaattaaattcacccccgaggagttagactactacctctatggacag
cagagaatggaaattattcctttgaacaatcacaccagcgacccaaataaccgttgtgac
atgtgtgttgataaccggaatggtgagtgccccatgcatggccccctgcactcattgcgg
agactggtgggaacaagcagctcggctgcctccgtccccccaccagagatccccgagtgg
ctgcgggatcttcccagggaagtgtgcctctgcaccagcaccgtgccaggactgggatat
ggaatttgtgcagcacagaggatcccgcagggcacatggattggtccctttcagggagtt
ccactgctgctggacaaacccaaacctggagttgggaggaactcgcgacacttgtgggag
atatatgaccaagaagggacattacagcactttatcgatggcagcgagcccagcaagtct
agctggatgaggtacatccgctgtgcaaggcactgtggggaacagaacatgatggtggtt
caatacaggtcatgtattttctacagagcgtgcatggacatcccccgtgggacagagttg
ctggtgtggtacaacgacagctacacatccttctttggaatcccactgcagtgtatcgca
caagatgaaaacttgaatgtccctgcatctgtaatggaagtaatgtcccgtcaggagaca
ctacagccctcctttaccaagactagcaaaggtccttcctccgtgctgcttcgctccatg
gtcttcccacacacctcgtgcactagaagcttctcacttttggacaagccaggccaagta
gaatctgggtttaaccaaatgaatggcaaaaaccagcgggtccttgtgagtcctacttca
acaagccaactgagctctgagttcagtgactggcatctctggaaatgtggtcagtgcttt
aagactttcacccagcgtatccttctccagatgcatgtgtgcacacagaacccagacagg
ccttaccagtgcggccactgctcccagtccttttcccagccttcggaactccgaaatcat
gttgtcacccattcgagcgacaggcctttcaaatgtggctactgcggccgcgcctttgcc
ggagcgacaaccctcaacaaccacatccgtacacacaccggggagaagccattcaagtgc
gagaggtgtgatcggagcttcacgcaagccacccagctgagtcgacaccagaggatgccc
aacgagtgcaagccaataatggagagcacagaatcaattgaagtggattaa
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