Polyodon spathula (Mississippi paddlefish): 121302655
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Entry
121302655 CDS
T07273
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00533
Glycosaminoglycan biosynthesis - keratan sulfate
pspa00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pspa01100
Metabolic pathways
Module
pspa_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121302655
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121302655
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121302655
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
121302655
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
121302655
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121302655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Mt_ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
121302655
NCBI-ProteinID:
XP_041088620
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All DBs
Position
30:8254091..8258958
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AA seq
215 aa
AA seq
DB search
MCFSSAFFKLPRKVKFLVLVGFCVMILTWIATFGNVTNAIRDRPRLVELVRSQKVVTEGL
RSAEELEWGNRHPSLAPVATLQSCPALSPHLRGPLALFFKPSLTLAEVERENARVVEGQY
EPPDCQARQSVAVLIPHRSREKHLRYLLQHLHPFLQRQQLHYAIYVIHQVQHDPRQTTTS
EECIQTVQQFISPPCNVQACEKVESVRNFFFFIQT
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttctcctctgcgttcttcaagctgccgcggaaagtcaagttcttggtgctggtt
ggcttctgcgtgatgatcctgacttggatcgccacctttggcaatgtgaccaatgcgatc
agagaccgtccacgcttggtggagttggtgaggtcacagaaggttgtgactgaggggttg
agaagtgcagaggagttggaatgggggaatcgccatccttctctagccccagtggccaca
ctccagtcctgccccgcactttctcctcatctacgtggtccgttggcactcttcttcaag
ccctctctaacactggccgaggtggagcgggagaatgcccgggtggtggaggggcagtat
gagcctccggattgccaggcccgccagagcgttgccgttctgatcccccaccgcagccgt
gagaagcacctgcgctacctgctgcagcacctgcaccctttcctgcagcggcagcagctg
cactacgccatctacgtcatccaccaggtacagcatgatccgaggcaaaccacaacatct
gaagagtgtatacaaactgtacagcaatttatctcgcccccatgtaatgttcaagcttgt
gagaaagttgaaagtgtcaggaattttttttttttcattcagacataa
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