Polyodon spathula (Mississippi paddlefish): 121302747
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Entry
121302747 CDS
T07273
Name
(RefSeq) vascular endothelial growth factor receptor 1-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121302747
04020 Calcium signaling pathway
121302747
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121302747
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121302747
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121302747
Protein kinases [BR:
pspa01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
121302747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VEGFR-1-like_Ig-like
Ig_3
I-set
Ig_2
ig
V-set
C1-set
Ig_4
C2-set_2
Motif
Other DBs
NCBI-GeneID:
121302747
NCBI-ProteinID:
XP_041088842
LinkDB
All DBs
Position
30:complement(1397789..1426087)
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AA seq
470 aa
AA seq
DB search
MICYILIICCGLAGNVLSKGSRSSSRLNTPVLSVTSKQIVIQASQTLQLQCKGKAQLAWT
SPDSVHPDQGRLSIKEYRCGFQDQLHCSSLTLRGASAQDTGAYACKYSTKKRKRQAAVYV
YIRDALKPFLELHSSIPEVVYLTEGRKLIIPCRVTAPDIPVTLKKFPEERLIPDGKKIIW
NSKHGFIIPDPTYQFIGLLSCEATSNGVLYSTKYLTHRQVNTIFDVYLNATNPLKMLRGE
TLAINCTVTAEWNARVQITWDYPGKGNSSALITNRIDQSSSNIFHSILVIKQLKDTDRGV
YSCNVQSGPSTRDTNTTLVIYDKPFISVKYRHRPTVEVTAGQDSFKLSLKVKAFPSPEVV
WLKDGMIAAEKCARYKIDGYTLIIRDVSEEDAGSYTLKLGIQQHNLYRNLTVSLVVNVKP
QIGEKAVSYQDPGTYLVGSKQALICTSHGFPPPRIQWLWHPCARNNTKGL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatttgttatatattgattatatgttgtggacttgctggaaacgtactgtctaaaggc
tctcgctcgagctccagactgaacactccagtgctgagcgtgaccagcaagcagatcgtc
atccaggccagccagactctgcagctgcagtgcaagggaaaggcacagcttgcctggacg
tcccccgatagcgttcaccctgatcaaggcagactgagcatcaaagagtacaggtgtgga
tttcaggaccagctgcactgcagcagcctcaccctgagaggggcctcggcgcaggacaca
ggagcctatgcctgcaaatactccaccaagaagagaaagagacaggcagctgtgtatgtt
tacatcagagatgcgctgaagcccttcttggagctgcacagtagcatcccggaggttgtc
tacctgacagaaggaagaaagctgatcatcccctgcagagtgactgcgcctgacatccct
gtcactctaaagaagttcccagaagaaagattgatccccgatggcaaaaaaattatctgg
aacagcaagcatggattcatcatccctgatcccacgtaccagtttatagggcttctgtca
tgcgaggcgacctccaatggggttctctacagcaccaaatacctaacacacagacaagtg
aatacaatctttgatgtgtacctcaatgccactaacccactcaagatgctgaggggagag
acgctagcaattaactgcactgttacagcggagtggaatgccagagtccagatcacgtgg
gactatccaggcaagggaaacagttctgctctcatcaccaatagaattgaccagagcagc
tccaacatcttccacagtatcctggtcatcaagcagctgaaggacactgacaggggcgtg
tactcctgcaacgtgcagagcggtccttccaccagagacacaaacaccacccttgttatt
tatgacaaacccttcatcagtgtgaaatacagacacaggcctacagtggaggtgactgct
ggtcaggactccttcaagctctccttgaaagtgaaagcattcccctccccggaggttgta
tggcttaaagatggaatgattgctgctgagaagtgtgctcgctacaagattgacggatac
accttaatcatcagagacgtatctgaagaagacgctgggagttacaccctaaagctgggg
atccagcagcacaatctctacaggaacctgactgtctcccttgttgttaatgtgaagccc
cagattggtgaaaaggctgtgtcctatcaagaccctggcacctaccttgtgggcagcaag
caagcactgatctgcacttcccatgggtttccaccgcccagaatccagtggctatggcac
ccgtgcgctcggaataacaccaagggactgtaa
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