Polyodon spathula (Mississippi paddlefish): 121302870
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Entry
121302870 CDS
T07273
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00780
Biotin metabolism
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
121302870 (hlcs)
Enzymes [BR:
pspa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
121302870 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
121302870 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
121302870 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
121302870 (hlcs)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_N
Motif
Other DBs
NCBI-GeneID:
121302870
NCBI-ProteinID:
XP_041089099
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All DBs
Position
30:3090522..3129249
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AA seq
924 aa
AA seq
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MLITLCYVYLWVRFQRCYTLVIRSTVHRLHRSSSFTFCSALKPAQLQRLKQRQGHSFSKQ
VTRPADLQETACIQLGSKVFYITDAQPCEDLSKWTLLRGTALIYLDSAPRREHVAFVLEA
ASGQEQGASLHKLPTSSKKILKWSDYCLPLACISGDPFKLIADASVDNFTRLGVAFMEDR
LQMDNGMVPEKIVSVLLEESALKKLVENTKMDEVKSPVSGTQTEQTEAEMPKLKETVSDN
ESGDNLQDGPQLAKTVQRLQKDQSSGRAQEENTNQAQSKDQKENQAYLGGDHHRDGHHLH
LSSCHECLDLENSTIESVKFASAENIHDLPDDYSGFGNRSEDESCTGQSRRVNVSGKPPN
VLVYTGSDPSRFQARYQQVKTILAECIDMDSYIVYHLLEEQVLKDPWAENSLLLVCASEE
LVPEKFHKLFLNYLSKGGKILGLASFFCFSGVSVAPKEALKNKIHKLCFTKADNTDIELD
VLTSGRVYENAAASRDSGVEFWGHLGNKDKDMVIVRLPYGDNGGEAILSQVLLDTPPDSQ
EIQDPEDFNMLKVSNARRYEVLTEILGALGLSCELSVVPPPSPLYLLATTESTRLSFLEW
LSTAVDTEGILRSSKVSLKVVSALQPGVELMEGIIPLVTQPSGFSSEQLDLQTYSRSLRS
RSLGQIVLFAEVTPTTMDLLDGLMLRLPQEMGLIAIAGRQTQGKGRGGNAWLSPLGCAMF
TLHVRVPVQSPLGQRIPFLQHLVALAVVEAVRTLPGYQDIDLRVKWPNDIYYSALMKLGG
VLVTTTLMGDTFHALVGCGFNVSNSNPTVCINDLIVQYNKENGSALKALSTTQLIGCSVT
VLESLIDAFQEKGVAGVLPLYYKRWVHSGTQVRLWSEQGPQACVVGLDDCGFLQVESEEQ
GVVSVQPDGNSFDMLRNLIVTKQR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgctgattacactgtgctacgtctatttgtgggtgcgattccagaggtgttacacgcta
gttatccgaagcaccgtgcacagactgcacaggagcagcagcttcactttctgcagcgcc
ctgaaacccgcgcagctgcagagattaaagcagcgccaggggcacagtttcagtaagcag
gtaactcgccctgcagacctccaggagacagcgtgcatccagctgggcagcaaggtgttt
tacattacagacgcgcagccctgtgaagacctgagcaagtggaccctgctccggggaaca
gctttgatttatttggactctgctcctcgacgagagcatgttgcgtttgtactggaagct
gcatcagggcaggaacagggagcctctttacacaagctgccaacttcatccaaaaagatt
ctaaagtggtcagactactgtttgcctctcgcctgcatctctggcgacccattcaagtta
attgcagatgccagtgtggataacttcaccaggcttggggtagcttttatggaggacagg
ttacaaatggacaatgggatggtaccagaaaaaatagtttctgtgttacttgaggaatct
gcactaaagaaactggttgaaaataccaagatggatgaagtgaaaagccctgtatctggt
acacagactgaacagactgaggcagagatgccaaagcttaaggagacggtatctgataac
gagtcgggggacaatctccaggatggaccacagcttgcaaaaactgtgcaaagactgcag
aaggaccaaagctcaggtagggctcaggaagagaataccaaccaggcacagagcaaggac
cagaaggagaatcaggcctatctgggaggggatcatcacagagacggacaccacctccac
ctttccagctgccatgagtgtctggatctggaaaacagcaccattgagtctgtgaaattc
gcctctgcagagaacattcacgatctgcctgatgactacagcgggtttggcaaccgcagt
gaggatgagagctgcactggccagtccaggcgggtcaatgttagcggaaagccacccaat
gtgctggtctacactggctctgatcccagtcggttccaggccagataccagcaggtgaag
accatcctggctgagtgcatagacatggacagctatatcgtctaccacttgctggaagag
caggttttgaaggacccctgggcagagaactccttgctgctggtttgtgcctcggaggag
ctagttcctgagaagtttcacaaactgttcctgaactacctttccaaggggggcaagata
cttgggctggcttccttcttctgcttcagcggggtcagcgtagctcccaaggaagccttg
aaaaacaaaatccacaagctgtgcttcactaaagctgacaacactgacatcgagctggac
gtgctgaccagcgggagggtctatgagaatgccgcagccagcagggacagtggtgtggag
ttctggggacacctggggaacaaagacaaagatatggtgatagtccgtctgccctatggg
gataatggaggggaagccattttgagccaggtgctcctggacactcccccagactcccag
gagatccaggaccccgaggatttcaacatgctgaaggtcagcaacgcccggcgctacgag
gtcctcacagagatcctcggcgctctcgggctgagctgtgagctgagcgtcgtgccccct
cccagccctctctacctcctcgccaccacagagtcaaccaggctttccttcctggaatgg
ctgtcgaccgcagtggacacagaggggatcttgaggtccagcaaggtctctctgaaagtg
gtttcagctctgcagcctggggtggagttgatggagggcatcattcctctggtcacacag
ccttcggggttctcctctgagcagttggacctccagacgtactcccggagcctgcggtcc
aggagcctggggcagatcgtcctctttgcggaagtgacgcccacgaccatggatctgctg
gacgggctgatgcttcggttgccacaggaaatggggttaatagctatagcaggccggcag
acacaaggcaaaggccgaggtgggaatgcatggctcagtcctctgggatgtgccatgttc
acactgcatgtgcgggtcccagtgcagtccccactggggcagagaattcctttccttcag
catttggtggctctggcagtggtggaggcagtccggaccctgcctgggtatcaggatatc
gaccttcgagtgaagtggccaaatgatatttactacagcgccctgatgaaactggggggt
gttctggtcaccacgacgctgatgggcgacacatttcatgcgcttgttggctgcggcttc
aatgtgagtaacagcaaccccacagtttgcatcaatgacctgatagtgcagtacaacaag
gagaatgggagcgctctgaaagccctgagcacaacccagctgattggctgcagtgtcact
gtgctggagagtctgatcgatgccttccaggagaagggagtcgccggggttctgcccctc
tactacaagagatgggtgcacagtggtacccaggtgcgtctgtggagcgagcagggcccg
caggcgtgcgtcgtgggtctggacgactgcggcttcctgcaggttgagtctgaggagcag
ggcgttgtctctgtgcagcctgatgggaactctttcgacatgctgagaaacctcatcgtc
accaagcagcgataa
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