Polyodon spathula (Mississippi paddlefish): 121305006
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Entry
121305006 CDS
T07273
Name
(RefSeq) cyclin-dependent kinase 7-like isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
pspa03420
Nucleotide excision repair
pspa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121305006
09124 Replication and repair
03420 Nucleotide excision repair
121305006
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121305006
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121305006
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121305006
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121305006
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121305006
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
121305006
2.7.11.23 [RNA-polymerase]-subunit kinase
121305006
Protein kinases [BR:
pspa01001
]
Serine/threonine kinases: CMGC group
CDK family
121305006
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121305006
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
121305006
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121305006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
RIO1
APH
Motif
Other DBs
NCBI-GeneID:
121305006
NCBI-ProteinID:
XP_041092414
LinkDB
All DBs
Position
2:99288512..99301557
Genome browser
AA seq
346 aa
AA seq
DB search
MMAGPVHSRAKRYEKLDFLGEGQFATVYKARERNTDKIVAIKKIKLGHRLEAKDGINRTA
LREIKLLQELSHQNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYTL
MTLQGLEYMHHHWVLHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYR
APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKVFEALGTPTEEQWPD
MTSLPDYVSFKMFPGTPLEHIFSAAGDDLLELLQGLFTYNPCTRLTASQALKKRYFSNRP
GPTPGPQLPRPSCSVEALKEQQNTSIGIKRKWDGAEPATLVKKLLF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggggccggtgcattctcgagcaaaacgatatgaaaagcttgattttcttgga
gagggtcagtttgccactgtgtacaaagcaagggaaagaaatacagacaaaattgttgcc
attaagaagattaagcttggacataggttggaagctaaagatggaattaacagaacagct
cttagagaaatcaagctactgcaagagttaagccatcagaacataattggacttctggat
gcatttggacacaaatctaatattagccttgtgtttgactttatggaaactgatcttgag
gtaataataaaggacactagtctggttttgaccccagcaaatatcaaggcatacaccctt
atgacacttcagggtcttgaatacatgcatcatcactgggtcttgcacagggatttaaag
cccaataacctgttgctagatgagaatggagtactgaaacttgcagattttggtctggca
aaagcttttggaagccctaatagagtgtacacacatcaagttgtcacaaggtggtacagg
gcaccagagctgctgtttggagccagaatgtatggcgtgggtgtagacatgtgggcagtt
ggctgtatattagcggagttgctccttagggtgccctttttgcccggagactccgatctt
gatcagctaacaaaagtatttgaagctttgggaactccaactgaagaacagtggcctgac
atgacgagcctgcctgactatgtatcgtttaaaatgtttcctggaactccactggagcat
atatttagtgccgctggggatgacctgctggagctgctacagggtctgtttacatataac
ccctgcacacgcctcacagcctcacaggccttaaaaaagagatatttcagtaacagaccg
ggacccacgccaggaccgcagctaccgaggcccagctgctcagtggaggctttaaaggag
cagcagaacaccagtatagggatcaagaggaaatgggatggagcagagccagcaacgcta
gtaaagaaattgctgttctaa
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