Polyodon spathula (Mississippi paddlefish): 121305536
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Entry
121305536 CDS
T07273
Name
(RefSeq) transcription factor E3-like
KO
K09105
transcription factor E3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121305536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121305536
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121305536
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GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
121305536
NCBI-ProteinID:
XP_041093122
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All DBs
Position
43:2823072..2835659
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AA seq
568 aa
AA seq
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MSNIASDQDRAEERVLILSTQAEQIISFDLGSSSSTSSRLLFPSQPAPHDQHQTVLVILD
SSLDNDNQFSLESLLPESGIVADIDVENILMSGEESFYQIKSQPITASPSSPLGPGPAPP
PAVMSSRVLLRQQLMKEQAQEQERREEQQERASSAQLRTSAPSPAISVSAPQGPRAAPAQ
VPVEVLKVQTHLENPTKYHIQQTQRHQVKQYLSTTMGNKAASQKLGASPSPQAGSAPGLA
PPTSAPNSPMALLNLGSNSEKGIDDVIDGIISLESSFADDMMGFINSGLQLSNTLPVSGN
LMDLYGTPSMSLPTVSNSCPAQLSNVKQETTDTDLHAGSGFCVTEVEVKAFMKERQKKDS
HNLIERRRRFNINDRIKELGTMIPKSSDPEMRWNKGTILKASVDFIRKLQKEQQRSKEME
MRQRKLEQQNRSLLLQVQELEMQARLHGLPTLASSLGSGDPVSQLLPQNHHQTNAGLLSA
PFVAPPPVTTSHAPSSLVSPAPALDLGSLNFSDLDDTTTFDLGLTSVVGLDDILMDEGGL
SPLRRGSDPLLSSVSPGSRSSFSMEEDS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacattgcctcggaccaagaccgcgctgaagagagagtattaattttgtcgact
caagcagaacagataattagttttgatcttggcagcagcagcagcaccagcagccggctg
ctgtttccgtcgcaaccggcaccgcacgaccagcatcagactgtgctggttattctggac
tcgagtctggataacgacaaccaattcagcttggagtctctccttcccgaatctgggatc
gtcgccgatatcgacgtggagaatatcctgatgtctggagaggaatcgttctaccaaatt
aagagccagcccatcacagccagcccctcctctcccctgggcccgggcccggccccgccc
cccgccgtgatgtcatcgcgagtgttgctgaggcagcagctgatgaaggagcaggcgcag
gagcaggagcggagagaggagcagcaggagcgagcgtccagcgcccagctccgcacctcc
gccccctcgcccgccatcagcgtgagcgccccacaggggccccgagccgcgcctgcacag
gtcccagtcgaggtgctcaaggttcagactcacttggagaatccaaccaaatatcacatc
caacaaacccagagacatcaagtgaaacagtacctctccaccacgatgggcaacaaagca
gccagtcagaaactgggggcgtcgccctcgccccaggccggctccgcccccggactggcc
cctcccaccagcgctcccaacagcccgatggcgttactgaacctcgggtccaattcagag
aaagggattgatgatgtcatcgatgggatcatcagtctggagtccagtttcgccgatgac
atgatggggttcataaactccggactgcagctttcaaacacactccctgtctctggtaac
ctgatggatctgtacggcacccccagcatgtcgctcccgaccgtgagcaactcctgcccg
gcccaactctccaacgtcaagcaagagacgactgacactgacctgcacgccggctctggc
ttctgtgtgacggaggtcgaggtcaaagcgttcatgaaggagaggcagaagaaggacagt
cacaatctcatcgagaggcgccgaaggtttaacatcaacgacagaatcaaagagttgggg
acaatgattccgaagtccagcgacccggagatgcgctggaacaaaggcacgatcctcaag
gcttcggtcgacttcatccggaagctgcagaaagagcagcagcgatcgaaggagatggag
atgaggcagaggaagctggagcagcaaaacaggagcctgctgctccaagtacaggaattg
gaaatgcaggcccgtcttcatggcctccccactctggcttcttccctcggctctggagac
ccggtctctcagcttctcccacagaaccaccatcaaaccaacgccggcctgctctccgcc
cccttcgtagcccctccccccgtcaccacaagccacgccccctcctccctggtcagcccc
gccccggccctcgatctgggctccctgaacttcagcgaccttgacgacaccacgaccttt
gacctggggctgacctcggtcgtgggtctggatgacattctcatggatgaagggggtctc
tcgcccctgaggcgaggctccgatcccctgctttcgtctgtctcacctgggagcaggagc
agcttcagcatggaggaggactcctga
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