Polyodon spathula (Mississippi paddlefish): 121307190
Help
Entry
121307190 CDS
T07273
Name
(RefSeq) isocitrate dehydrogenase [NAD] subunit beta, mitochondrial-like
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00020
Citrate cycle (TCA cycle)
pspa01100
Metabolic pathways
pspa01200
Carbon metabolism
pspa01210
2-Oxocarboxylic acid metabolism
pspa01230
Biosynthesis of amino acids
Module
pspa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pspa_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
121307190
Enzymes [BR:
pspa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
121307190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iso_dh
AAA_3
Motif
Other DBs
NCBI-GeneID:
121307190
NCBI-ProteinID:
XP_041095266
LinkDB
All DBs
Position
2:complement(108466740..108487008)
Genome browser
AA seq
384 aa
AA seq
DB search
MSAAVRGALSAVSKGFIAPWGLISSRALGTTPCLQHPTGSQGDPVRADVQFKVTMVPGDG
VGPELMTAVKEVFKAGDVPVVFEEFHLSEVQNTASEGKLEQVLNSMRSNRVAIKGKIYTP
MEYKGELASYEMKLRRKLDLFANVVRVNSLPGYKTRHNNLDLVIIREQTEGEYSSLEHES
VTGVVECLKIITRVKSRRIAKFAFDYATKNGRSKVTAVHKANIMKLGDGLFLQSCQEVGE
LYPKIKFETIIIDNYCMQLVQDPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSA
EYAVFETGARHPFAQAVGRNIANPTAMLLSSANMLHHLNLEYHSNLISEAVKRVIKLGKV
RTGDLGGYASCDEFTRAVIGNLGC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcggtgagaggagcgctttctgccgtgtccaagggcttcattgctccatgg
ggactgatcagctccagagctctcgggaccacaccctgcctccagcacccgacaggcagc
cagggtgaccctgtgcgggcggatgtgcagttcaaggtaacgatggtccctggggatgga
gtgggacctgagctcatgactgccgtcaaggaggtcttcaaggcaggcgatgtccccgtg
gtttttgaggagtttcacctcagtgaggttcagaacacggcatcagaggggaagctggag
caggtcctcaactccatgagaagcaaccgggtagccatcaaaggaaagatctacaccccc
atggagtacaagggagagctggcatcatatgagatgaaactgagacggaagctggacctg
tttgccaatgtggttcgtgtgaacagtcttcccgggtataaaactcggcacaacaacctg
gacctggtgatcattcgggagcagacggagggagagtacagctctctggagcatgagagt
gtgacgggcgtggtcgagtgtctcaagatcatcactcgagtgaagtcccggcgcatcgcc
aagttcgccttcgactacgccacaaagaatgggcggtcaaaggtcaccgccgtgcacaag
gccaacatcatgaagctaggggatggtcttttcctgcagagctgtcaggaggtgggtgaa
ctgtacccaaaaatcaagtttgagaccatcatcatcgacaactactgcatgcagctggtg
caggacccgtaccagtttgacgtgctggtgatgcccaacctgtatgggaacatcattgac
aacctggcggctggtctggtggggggcgctggggtggtgcctggagagagctacagcgcg
gagtacgctgtcttcgagacgggcgctcggcaccccttcgctcaggcagtgggccggaac
attgccaaccccaccgccatgctgctcagctccgcaaacatgctgcaccacctcaacctg
gagtatcactccaacctgatctctgaggcagtgaagagagtgatcaaactgggcaaggtc
cggaccggagatctggggggctatgcttcctgtgatgagttcacacgtgctgtcatcggc
aacctgggctgctga
DBGET
integrated database retrieval system
