Polyodon spathula (Mississippi paddlefish): 121308014
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Entry
121308014 CDS
T07273
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03020
RNA polymerase
pspa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121308014 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
121308014 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121308014 (polr2c)
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121308014 (polr2c)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121308014 (polr2c)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121308014 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
121308014
NCBI-ProteinID:
XP_041096244
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMAEVPTIAIDWIQIDANSSVLH
DEFVAHRVGLIPLTSDDIVDKMQYSRDCTCDEFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVCFEYDPDNALRHTVFPRPEEWPKSEYSEIDEDEVQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALAGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgccaaccagccgacggtaaaaatcactgaactgacagacgagaatgtgaag
tttgtcatcgagaacacagatctagcggtggcaaactctatccgccgagtcttcatggca
gaagtcccaacaatagctattgattggatccagatcgatgcaaactcctctgtcctacat
gatgaatttgtcgcacacagagtgggtttgatccctctgaccagtgatgatattgtggac
aaaatgcagtactccagggactgcacttgtgacgagttctgtccagaatgctccgtggag
ctcacccttgacgtcaggtgcacagaagaccagacgcgacatgtgacctcccgcgatctt
ctctccaacaaccccagggtcatcccggttacttctcggagcagggataatgatcctaat
gattatgttgagcaagacgatatcctgcttgtgaaactgcgaaagggccaagaactgcgt
ctcagagcctatgccaaaaagggctttgggaaggaacacgccaaatggaatcccactgca
ggggtgtgtttcgagtacgatccggacaatgcactcagacacacggtcttccctcgtcca
gaggaatggcccaaaagtgaatactcagaaattgatgaagacgaggtgcaggctccctac
gaccccaatgggaaacctgagaggttttactacaacgtggagtcgtgcggctcgctgcgg
cccgaaaccatcgtcttgtctgctctggccgggttaaagaaaaaactgagtgacttgcag
acccagctgagccatgagatacagagcgatgtcctcactattaattaa
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