Polyodon spathula (Mississippi paddlefish): 121312748
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Entry
121312748 CDS
T07273
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00250
Alanine, aspartate and glutamate metabolism
pspa00410
beta-Alanine metabolism
pspa00430
Taurine and hypotaurine metabolism
pspa00650
Butanoate metabolism
pspa01100
Metabolic pathways
Module
pspa_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121312748
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121312748
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121312748
00430 Taurine and hypotaurine metabolism
121312748
Enzymes [BR:
pspa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
121312748
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
SepSecS
Motif
Other DBs
NCBI-GeneID:
121312748
NCBI-ProteinID:
XP_041100412
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All DBs
Position
3:14927105..14957430
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AA seq
550 aa
AA seq
DB search
METPASLIETLKAEGKHKADPLWLKTPQHILPSENENRERQSGTESRNTNFSTMYGQDLL
PAKNGEENTKQFLSEVVHILLNYVSKSFDRNTKVLDFHYPHQLKDGLEGFSLELSDNPEN
LEQLLVDCRDTLKYGVKTGHPRFFNQLSTGLDVIGLAGEWLTATANTNIFTYEISPVFIM
VEEILLKKMYEKIGWTSEEGDGIFSPGGSISNLYSVLLARYYRFPEVKMKGMASVPRLVL
FTSEHSHYSIKKAAAVLGIGTENVILVKCNERGKMIPSELESKIVETEMKGFVPFYVNAT
AGTTVYGAIDPLSEIADICEKYKLWMHVDAAWGGGLLMSRKHSVKLSGIERASSVTWNPH
KLMGAPLQCSAILIREKGLLQMCNQLCADYLFQPDKHYDVSYDTGDKAIQCGRHVDVFKF
WLMWKAKGAAGFEVQVNKCLDNAEYLYNKLKQKVDFKLVFDGKPEHSNVCFWYIPPSLRE
LPNGQERSKRLHEVAPRIKSKMMEEGTTMIGYQPQGENVNFFRCVFSNPATSKADVDFLI
EEIVRLGNDL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccagcaagtttaattgagacactgaaggctgaaggaaaacataaagcggac
cctttatggctaaaaactccgcagcatatcctaccatcagaaaatgaaaatagagaaagg
caatctggtactgagagcagaaacactaatttttctacaatgtatggccaggacttgttg
ccagcaaagaatggtgaggaaaacactaagcaattcctctctgaagtggtccacatactc
ctaaactatgtcagcaaatcctttgacagaaacaccaaagttctggacttccactaccca
catcagctcaaggacggtcttgaaggatttagtttggagctgtctgataatcctgaaaat
ttagaacagcttcttgtggactgcagagacaccttaaaatatggagttaaaacaggtcac
cctcgtttttttaaccagctgtcaactgggcttgatgttattggattagctggtgaatgg
ctgacagcaactgccaacacaaacatatttacatatgaaatatcaccagtttttataatg
gtggaagaaatcctcctcaagaaaatgtatgaaaagattggctggacatcagaagaggga
gatggcattttctcacctggtggatccatatctaatctttacagtgtgttgctggctcga
tattaccggtttcctgaggtgaagatgaaaggaatggcttctgtccccagactggtgcta
tttacatctgaacatagtcactattctatcaaaaaggctgctgcagtactcggaattgga
acagaaaatgttattttggtcaaatgtaacgagaggggaaagatgatcccctctgaactg
gaatcgaaaattgtggaaactgaaatgaagggttttgttcctttttatgtgaatgctaca
gctggtactacagtatatggagcaatcgatcctctaagtgagattgcagacatttgcgag
aagtacaaactgtggatgcatgttgatgcagcatggggtggtggtcttttgatgtcaaga
aagcactctgtgaaactcagcggaatagagagagctagctctgttacctggaatcctcat
aaactcatgggtgctccacttcagtgttctgccatactcattcgagaaaagggtctcctc
cagatgtgtaaccagctctgtgcagactacctgtttcagcctgacaaacattatgatgtt
tcctatgacactggagacaaggccattcagtgcggcaggcacgttgacgtctttaaattc
tggttaatgtggaaggctaagggtgcagcagggtttgaagtacaagtcaataagtgtctg
gataatgctgagtacttgtacaacaaactgaagcagaaagttgattttaaacttgtgttt
gacggcaaacctgagcatagcaatgtttgcttttggtacattccaccaagtctgagagaa
ttgccaaatggccaagagagaagcaagagacttcatgaggttgccccaaggataaaatca
aagatgatggaagaaggaacaacaatgattggctaccagccacaaggagaaaatgtgaat
ttcttcaggtgtgttttttccaacccagctacaagcaaggcagatgttgatttcctcatt
gaggaaatagtgaggctgggaaacgatctgtga
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