Polyodon spathula (Mississippi paddlefish): 121312797
Help
Entry
121312797 CDS
T07273
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like isoform X1
KO
K01116
phosphatidylinositol phospholipase C, gamma-1 [EC:
3.1.4.11
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00562
Inositol phosphate metabolism
pspa01100
Metabolic pathways
pspa04012
ErbB signaling pathway
pspa04020
Calcium signaling pathway
pspa04070
Phosphatidylinositol signaling system
pspa04370
VEGF signaling pathway
Module
pspa_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121312797
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
121312797
04370 VEGF signaling pathway
121312797
04020 Calcium signaling pathway
121312797
04070 Phosphatidylinositol signaling system
121312797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121312797
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
121312797
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121312797
Endocytosis
Macropinocytosis
Phospholipase C
121312797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
SH2
PI-PLC-Y
C2
SH3_1
PH
SH3_9
PH_12
SH3_2
EF-hand_6
EF-hand_like
EF-hand_5
EF-hand_7
GDPD
Motif
Other DBs
NCBI-GeneID:
121312797
NCBI-ProteinID:
XP_041100506
LinkDB
All DBs
Position
3:18344540..18401289
Genome browser
AA seq
1315 aa
AA seq
DB search
MSLARLGTNSNGILEDTSNGTIPISTLRMLDWGESGGRVLRSLDIGTVMTLFYQKKSQRP
ERRTFQVKQETRQIIWSRNRDKIEGEIDIREIKEIRLGKSSRDFDRYPEEVRKLDSSQCF
IILYGMEFRLKTLSVAAFSEEEVTLWITGLTWLVMDSQKASAPYQINRWLRKQFDSMDRN
REGSISVKDLKAMLPQANYRVPNMRFLRDKLLCLVPSPQEVEARSELSFTHFTQLYKNLM
FDAQKSIIDQLELSFPLRNVDRPELCQITLYDFQKFLQLDQKEGWASDLNKVREFMCSYQ
KESQRHTEPTLQLDEFLTFLLSKENMIVERGGGQVRPEEMKHPLSQYWISSSHNTYLTGD
QFSSESSLEAYARCLRMGCRCIELDCWDGPDDLPIIYHGHTLTSKIKFLDVLYTIKEQAF
VTSEFPVILSIEDHCSVVQQRNMASLFKKVFGDMLLTKPVDINADELPTPYQLRRKIIIK
HKKLVEGNMYEEVSSASYSENDISNSIKNGILYLEDPIDHNWSPHYFVLTSNKIYYSEET
SCYQSTDEEEEEEHKEESNNNELHFNEKWFHGKLGGGRDGRQIAEKLLHEYCGESGGKDG
TFLVRESETFVGDFTLSFWRSSRVQHCRIHSRQEAGVTKFYLTDNLVFDSLYSLICHYRE
VPLRCNEFEMRLSDPVPQPNAHESKEWFHANLSRLQAEHMLMRVPRDGAFLVRKRSEPNS
FAISFRAEGKIKHCRIQQEGRLFMLGSSAEFESLLDLISYYEKHPLYRKMRLRYPINEET
LEKMGTTELDYGALYEMRTPHFYVEANKMPTARCTVKALYDYRAQREDELSFPKQAIILN
VDKQEGGWWRGDYGGKKQLWFPANYVEEIPTSRAQGQDEASVENSPLGNFLKGFIDVPTC
HVVVHKDGKSSRPFVFTLHSQSHPVQMLDVAADTLEDLNDWVAKIREATQNADARMQEGK
QMERRKKIALELSELVVYCRPVPFDEDKIGTDKAYYRDMSSFPETKAEKYANRSKGKKFL
QYNRRQLSRIYPKGQRLDSSNYDPLPMWLCGSQLVALNFQTPDKPMQLNQALFTLGGQSG
YVLQPDILREDSFDPFDKSSLKPVEPITVQLQILGARHLPKNGRSIVCPFVEVEVCGAEY
DSSKCKTDVVADNGLNPVWLHKPFVLDINNPDFCFLRFVVYEEDMFSDPNFLAQAVFPVK
ELKTGYRSVPLKNSYSEDLELASLLVHIEIVNAKEEDDENLYSSIQQLRDRTSELSTQVS
SFERSNACDQRYQQRVDELRAAQEQLTELTETRTRRLMEKKRREKLRQQMATKRS
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgccaggctaggcaccaattcgaatgggattttggaggacacctctaacggc
actatcccgatcagcacgctccggatgctggactggggcgagtctggcggccgggtgctg
cggagcttggatattggcacagtcatgactcttttctatcagaagaagtcccagagaccc
gagagaagaactttccaggttaaacaagaaaccagacagatcatatggagccgcaaccgt
gacaaaatagaaggagaaatcgatatccgggagatcaaggagatccggctggggaagtcc
tctcgtgatttcgatcggtacccggaagaggtgaggaagctggactcctctcagtgcttc
atcatcctgtacggcatggagttccggctcaagactctcagcgtggccgcctttagtgag
gaggaggtgaccctgtggattactggcttgacctggctggtaatggactcacagaaggct
tctgcaccttatcagatcaacaggtggctccggaaacagtttgactccatggacaggaac
cgagaaggcagcatctcagtgaaggatttgaaagccatgctgccccaggcaaactacaga
gtacccaacatgagattcctcagagacaaactgttgtgtctcgttccttctccccaggag
gtagaagctcgctctgaactgtctttcacacacttcactcagctctacaagaacctcatg
ttcgacgcccagaaatcaatcattgaccagctcgagctgtccttccctctcaggaacgtg
gatcgtccggagctctgtcagataaccctgtacgacttccagaagttcctccagttagat
cagaaggaaggctgggcgagcgatctcaacaaggtgagagagttcatgtgcagctaccag
aaagagtctcagagacacactgaacccacactgcagctggatgagttcctgacgttcctg
ctgtcgaaggagaatatgatcgtggagcgaggcggcgggcaggtccgccctgaggagatg
aagcacccgctgtcacagtactggatcagctcctctcataacacgtacctgactggtgac
cagttctccagtgagtcatcactggaagcctatgctcgctgtctccgaatgggctgccgc
tgcatcgagctggattgctgggatgggccagacgacctgcccatcatctaccacggacac
actctgacatccaaaatcaagttcctggatgtactgtacaccatcaaagagcaggccttt
gttacctctgagtttcctgtcatcctgtccatcgaggaccactgcagcgtggtccagcag
aggaacatggcctcgctcttcaagaaggtctttggagacatgctgctcaccaagccagtg
gacatcaatgcagatgagctccccaccccataccagctccgcaggaagataatcatcaag
cacaagaagctggtggaagggaacatgtacgaggaggtgtcttcagccagctactctgag
aacgacatcagcaactccatcaagaacggaatcctgtacctggaggaccccatcgatcat
aactggagccctcactactttgtgctgaccagcaataagatctattactctgaggagacg
tcatgctaccagagcacggacgaggaggaggaagaggagcacaaggaggagtccaataac
aacgagctgcacttcaatgagaagtggtttcatgggaagctgggtggaggtcgcgacggg
aggcagatcgcagagaagcttctccatgagtactgcggggagagtgggggcaaggatggc
acattcctggtgagggagagtgagaccttcgtgggagactttaccctgtccttctggagg
tctagccgagtccagcactgccggatacactcgcgacaggaggccggtgtcacgaagttc
tacctgacagataacctggtcttcgacagcctctacagcctgatctgccactaccgcgag
gtgcccttgcgttgcaatgagtttgagatgagactgagcgaccctgtgccccagcccaat
gcacacgagagcaaggagtggttccacgcgaacttgtcccgcttgcaggccgagcacatg
ctgatgagggtcccacgtgacggagccttcctggtgcgcaagcggagcgagcccaactcc
ttcgcaatctccttcagggcggaggggaagataaagcactgtcggatccagcaggagggt
cgtctcttcatgctgggcagctcagctgagtttgagagtctgctggacctgatcagctac
tacgagaagcacccgctgtaccgcaagatgagactgcgctacccaatcaacgaggagacg
ctggagaagatgggcaccacggagctggactatggagcactgtacgaaatgcggactcct
cacttctacgtggaagcgaacaagatgcctacagccaggtgcacagtgaaggctctgtat
gactatcgagcccagagggaggacgaactctccttcccaaagcaagccatcattctcaac
gtggacaagcaggaggggggctggtggcgtggtgactacgggggtaagaagcagctgtgg
ttcccagccaattatgtggaggagatccccacctcccgtgcacaggggcaggacgaggca
tccgtcgagaacagccccctgggaaacttcctcaagggctttattgatgtgccgacctgc
cacgtagtggttcacaaggatgggaagagctcccggcccttcgtcttcaccctgcattcc
cagtctcatcctgtccagatgctggacgtggccgctgacactctggaggacctcaacgac
tgggtcgccaagataagagaggctacacagaatgccgatgccaggatgcaggaagggaag
cagatggagcgcaggaagaagattgccctggagctctcagagctggtggtgtactgccgg
cccgtgcccttcgacgaggacaagatcggcacagacaaggcttattaccgtgacatgtcc
tcgtttcctgagaccaaggctgaaaagtatgctaaccgcagcaagggcaagaagttcctg
cagtacaaccgaaggcagctctctcgtatctaccccaagggccagcgcctcgactcctcc
aactacgaccccctgcccatgtggctgtgcgggagccagctggtcgccctcaacttccag
accccagacaagccaatgcagctgaaccaggccctgttcacactgggggggcagagtggc
tatgtgctgcagcctgacatcctgagagaggacagcttcgaccccttcgacaagagcagc
ctcaaaccggtggagcccatcactgtgcagctgcagatcctgggagcgcggcacctcccc
aagaacggccgcagcatcgtttgccccttcgtggaggtggaggtgtgcggagctgagtac
gacagcagcaagtgcaagactgacgtcgtggcggataatggtttgaatccagtctggttg
cacaagccatttgtgttggacatcaacaaccctgacttctgcttcctgcgcttcgtagtg
tatgaggaggacatgttcagcgaccccaacttcctggcgcaggctgtgtttcccgtcaag
gagctcaagactgggtatcgctcagtccctctgaagaacagctacagtgaagatctggaa
ctggcctccctgctggtgcacatcgagattgtcaatgccaaggaggaggacgatgagaac
ctgtactcctcgatccagcagctccgggatcgcaccagtgagctgtccacccaggtgtcc
tccttcgagaggagcaacgcctgtgaccagcgataccagcagcgtgtggacgagctccga
gcggcacaggaacagctcactgagctcacagagactcgcacccgcaggctgatggagaag
aagaggcgggagaaactacggcagcagatggcgacaaaacgcagctaa
DBGET
integrated database retrieval system
