Polyodon spathula (Mississippi paddlefish): 121314791
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Entry
121314791 CDS
T07273
Symbol
glb1
Name
(RefSeq) beta-galactosidase isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00052
Galactose metabolism
pspa00511
Other glycan degradation
pspa00531
Glycosaminoglycan degradation
pspa00600
Sphingolipid metabolism
pspa00604
Glycosphingolipid biosynthesis - ganglio series
pspa01100
Metabolic pathways
pspa04142
Lysosome
Module
pspa_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
121314791 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
121314791 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121314791 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
121314791 (glb1)
00511 Other glycan degradation
121314791 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121314791 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121314791 (glb1)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
121314791 (glb1)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121314791 (glb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
121314791
NCBI-ProteinID:
XP_041104401
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All DBs
Position
4:69345099..69389085
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AA seq
657 aa
AA seq
DB search
MAFPGGVLLWSLLLLSTVAIEITLSSSHTFEIDYENDCFRKDGKPFRYISGSIHYNRVPQ
YYWKDRLVKMYMAGLNAIQTYVPWNYHEPSPKQYNFTGDRDLESFLQLANDIGLLVILRP
GPYICGEWDMGGLPAWLLKKKDIVLRSSDPDYIAAVDQWMGELLPRIKPFLYQNGGPVIT
VQVENEYGSYFACDYNYLRHLTKLFRSHLGDEVVLFTTDGAGEGYLKCGALQGLYATVDF
GPGGNVTAQFLTQRHAEPRGPLVNSEFYTGWLDHWGEQHSIVDKNIVAKSLNEILAAEGN
VNLYMFIGGTNFAYWNGANTPYAPQPTSYDYDSPLSEAGDLTDKYFAIRDVIKMYRKVPD
GPIPPSTPKFAYGAVKMKPLLTVTDALDMLSFSGPVKSSYPLTFIEMNQLFGFVLYRTVL
PKDCSEPIPLSSPLNGVHDRAYVTVDGVPNGILERDKTLTINITGKAGNKLDVLVENMGR
INYGKDINDFKGLVSNLTLGPNLLSGWLIYTLNIDDAVSSGLLNERQEYRRGTPAPSKLL
APAFFAGSFKIPSGIPDLPQDTYIRFPGWRKGQVWINGFNVGRYWPARGPQVTLYVPAHI
LSTTAPNNLTVLELESSPCDSGPCTVEFVDTPLLNATVAHSTLQKELFVKDTWLHSN
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggctttccccgggggtgtgttgttgtggtcgttgctgttgttatcgaccgtagcaatt
gaaataacactttcatcttctcacacttttgagattgattatgagaatgactgttttcgc
aaagatggcaaaccatttcgctacatctccggcagcattcactacaaccgagtacctcaa
tattactggaaggaccgactagttaagatgtacatggcaggattaaatgcaattcagacg
tatgttccatggaactaccacgagccttcacccaagcaatacaactttacaggagaccgg
gatttggaatcatttttgcagctggccaatgacattggattattggtgattctgagacct
gggccgtacatttgtggagaatgggatatgggtggcttacctgcgtggttattgaagaag
aaagatattgtgctgcgatcttctgatcctgattacattgctgctgtagaccagtggatg
ggtgaactgctccctagaatcaagccttttctgtatcagaatggaggtccagtgattaca
gtgcaggttgaaaatgaatatggtagctactttgcatgcgattacaattatctgcggcat
ctcacaaagcttttccggtcccatctgggggatgaagtggtgctgttcacaactgatggt
gccggtgaaggttacctaaagtgtggggcgttgcagggactttatgcaacagtggatttc
gggccaggtggtaatgttacggcacagttccttacacaaagacatgctgaacccagagga
ccactggtgaactctgagttttacacaggctggttggaccactggggtgagcagcactcg
attgttgacaaaaacattgtagcgaagtcgctgaatgaaatccttgctgctgaaggcaac
gtcaacctatatatgtttattggcggaactaactttgcttattggaatggtgcaaacact
ccatatgctccccaacccactagctatgactatgactctcctctgtctgaggcaggggat
ctgactgacaaatactttgccatacgggatgttataaaaatgtacagaaaagtacctgat
ggtccaatacctccatctacccctaagtttgcctatggagctgttaaaatgaaaccgctt
ctgacagtcacagacgcccttgatatgctgtcgttttctggaccagtcaaaagcagctac
cctttgaccttcattgaaatgaaccagctttttggatttgttctgtatcgcacagtctta
cctaaagactgcagtgagccgatccctctatcatcaccattaaatggtgtccatgatcgt
gcttatgtgactgttgatggggttccaaatggtattcttgagagagacaaaactttaacc
attaatattactggaaaagctggaaataagcttgacgtacttgtggagaacatgggcaga
ataaactatggcaaagacatcaatgactttaagggtcttgtgtccaatcttaccctgggt
ccaaacctcctgagcggctggttaatctacacattgaatattgacgatgcagtcagcagt
ggcctcttaaacgaaagacaggaatacagacgtggcacgcctgcaccttccaaactcctc
gctcctgccttctttgcaggtagctttaagattcctagtgggatacctgatctacctcaa
gacacctacatcagattccctggctggagaaagggtcaagtttggatcaatgggtttaat
gtcggtcggtactggccggccagaggccctcaagtgaccttgtacgtcccagctcacatc
ctgagtacaacggcacccaacaacctcacagtgctggaactggagagctctccctgtgac
tcagggccctgcactgtggagtttgtggatacacctctcttgaatgctacagtggcacac
tccacactacagaaagagttgtttgttaaggacacctggcttcattccaattga
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