Polyodon spathula (Mississippi paddlefish): 121314885
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Entry
121314885 CDS
T07273
Symbol
fxn
Name
(RefSeq) frataxin, mitochondrial isoform X1
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
121314885 (fxn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121314885 (fxn)
Enzymes [BR:
pspa01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
121314885 (fxn)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
121314885 (fxn)
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Gene cluster
GFIT
Motif
Pfam:
Frataxin_Cyay
Motif
Other DBs
NCBI-GeneID:
121314885
NCBI-ProteinID:
XP_041104557
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Position
1:complement(16806432..16814727)
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AA seq
229 aa
AA seq
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MLGMASKGLCVYKCLQNSQLHQTWSFMSRVISSLSGSCQLYSSSSFKHAFSWTPSLLQSQ
PGHPRTCWWTGVSAKFINPRLPSKTWIQSIHCTSTRHLENTKNASLIDEATYEGLAEETL
DALAEYFEDLSEKPFTTAEYDVTFMSGVLTIKIGGEHGIYVLNKQTPNKQIWLSSPTSGP
KRYDWTGKNWVYSHDGKSLHDLLTKEFSAIFNTKIDLSSLMHSGLENTN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgttaggaatggcaagtaaaggtctatgtgtttataaatgtttgcagaactcccagctt
catcagacatggtcatttatgtccagagttatcagctcgctatcaggaagttgtcagcta
tacagttccagcagttttaagcatgcattttcctggaccccgtctctgctgcaaagtcag
ccaggacacccaagaacatgctggtggaccggggtatcagctaagtttattaacccacgt
ctgcctagtaaaacatggatccagagtattcactgcacaagtacaagacacctagaaaat
accaaaaatgcaagcttgatagatgaggctacttatgaaggacttgcagaggaaaccctt
gatgcattagcagaatactttgaagatctctcagaaaagccttttactactgcagagtat
gatgttacatttatgagtggggtacttacaataaaaataggaggagaacatggaatatat
gtgctaaacaagcagacaccaaataaacaaatatggctgtcctctccaaccagcgggccg
aaacgttatgactggacgggcaagaactgggtgtattcgcatgatggaaagagtttacat
gaccttcttacaaaagaattctctgcgatttttaataccaagatagacttgtctagttta
atgcattctggactggaaaacaccaattga
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