Polyodon spathula (Mississippi paddlefish): 121315581
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Entry
121315581 CDS
T07273
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3A-like isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00270
Cysteine and methionine metabolism
pspa01100
Metabolic pathways
pspa04148
Efferocytosis
Module
pspa_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
121315581
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121315581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315581
03032 DNA replication proteins [BR:
pspa03032
]
121315581
03036 Chromosome and associated proteins [BR:
pspa03036
]
121315581
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
121315581
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121315581
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
121315581
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121315581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADD_DNMT3
ADDz_Dnmt3b
DNA_methylase
PWWP
Motif
Other DBs
NCBI-GeneID:
121315581
NCBI-ProteinID:
XP_041105727
LinkDB
All DBs
Position
5:complement(12938431..13116022)
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AA seq
959 aa
AA seq
DB search
MPSNAATATTTTTFKSSDFDHDAAAYKVNDAQPLERSQEEKPTHSIPAKKAGRPGRKRKQ
PPVDSCDTSKECVVGPKCHSSTGSKSSVQAHNGDMDSSPGDISAASSQQNKDKGVPENGV
SKEPSRKATELDEMAQEGDGKGEQGASLENGCFTHWEDQGSEKGEEEQLQPTPRKKRGRQ
KLEHPEKYTEEEEETSYDPVKTEQGTRARLRGGLGWKTSLRQRPMQRITFQAGDPYYINK
RKSDEWLAKWKMEAEKRATLVAVMNSLEETVGNEKQKEEEEEEVSSEAPSQQPTDPVSPT
VATTPEPVGAEALEKTASKSVDDEAEYEDDRGFGIGELIWGKLRGFSWWPGRIVSWWMTG
RSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSSFSNAFHQPTYSKQPMYKKAIYEVLQVAS
SRAGKIFPACPDNDETDTSKTVDFQNKQMIEWAMGGFQPSGPKGLEPPEDERNPYKEVYT
EMWEEPEAAAYTPPPPAKKPRKSTEKPKIKEIVDEGTRERLVYEVRQKCRNIEDICISCG
SLNVSIGHPLFMGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCF
CVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGIYGLLKRREDWPTRLQHFFANNHDQDFE
APKLYPPVLAEKRKPIRVLSLFDGIATGLLVLKDLGIQVERYIASEVCEDSITVGIVRHQ
GRIMYVGDVRNVTRRHLHEWGPFDLVIGGSPCNDLSIVNPARKGLFEGTGRLFFEFYRLL
HEARPKEGDNRPFFWLFENVVAMGVSDKRDISRFLECNPVMIDAKDVSAAHRARYFWGNL
PGMNRLVRERPLVAMINDKLDLQDCLEHGRTAKFSKVRTITTRSNSIKQGKDQHFPVYMN
EKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFAPLKEYFACV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaacgctgccacagccaccactaccaccacattcaaaagttccgacttcgat
catgacgcagctgcatataaagtgaatgacgcgcaaccgctagagaggagtcaggaggag
aagccaacccacagcataccagcgaagaaagcaggtcgacctggcaggaaacgcaagcag
ccgccggttgatagctgtgatacctcaaaggaatgtgtggtggggcccaagtgccattcg
agcacagggagcaagtcctcggtgcaggctcacaacggagatatggacagtagtcctgga
gacattagtgccgcctcctcccagcagaacaaggacaagggtgtcccggaaaacggtgtc
tccaaagagccttcccgtaaggctactgagctggatgagatggctcaagaaggggacggg
aagggagagcaaggtgcctctctcgagaatggctgcttcacacactgggaggaccaaggc
tcagagaaaggagaagaggaacagttgcaacccactccccgaaagaaacgtgggaggcag
aaactggaacatcctgagaaatacacagaggaagaagaggagaccagttatgatccagtc
aaaacagagcagggaactcgagccaggcttcgtgggggactgggctggaaaaccagccta
cgtcagaggcccatgcagagaataaccttccaggccggggacccttattacattaacaag
aggaagagtgatgagtggctggccaaatggaagatggaggcagagaaaagggccacactt
gttgctgtgatgaactcactggaggaaactgtcgggaacgagaaacagaaggaggaggag
gaggaggaggtgtccagcgaggccccctcccagcagcccacagatcccgtctcacccact
gtggccaccacccccgagcccgtcggagcagaggccttggagaaaactgcctctaagtca
gtggatgacgaagccgaatacgaggacgaccgtggcttcggaatcggggagctgatctgg
gggaagctgcgcggattctcctggtggcctggacgcatcgtctcctggtggatgacaggg
aggagcagagctgccgaaggaaccagatgggtcatgtggttcggtgacggcaaattttcg
gtggtctgtgtggagaagctgatgcctttgagttcattttcgaatgcctttcaccagcca
acctatagcaaacaacccatgtacaagaaagcaatttacgaggtcctccaggtggcaagc
agcagagcaggtaaaatcttcccagcatgtcctgacaatgacgaaactgacacgtccaaa
acagtggactttcagaacaagcagatgatcgaatgggctatggggggatttcagccctcg
ggtccaaagggtctggagccaccagaagacgagcgcaatccctacaaagaagtttacacg
gagatgtgggaggagcctgaagcagcagcctatacaccccctcccccggctaaaaaacca
agaaaaagcacagagaaacccaagatcaaggagatcgtagatgagggaacccgagagaga
cttgtttatgaagtgaggcaaaaatgcaggaacatcgaagatatctgcatttcctgtgga
agtctgaatgtttccattggccatcccctcttcatgggaggcatgtgccaaaactgtaag
aattgtttcctggaatgtgcctatcagtatgacgatgatggttaccagtcatactgcacc
atctgctgtgggggtcgagaggtcctcatgtgtggaaacaataactgttgtcggtgcttc
tgcgtggagtgcgtggatcttcttgtcggaccaggcgcggcgcaggctgctatcaaagag
gacccctggaactgctacatgtgtggccacaagggcatctatgggctgctgaaacggagg
gaagactggcccacccggctccagcacttctttgccaataaccatgaccaagattttgaa
gcaccaaagctttaccctcccgtcctagctgagaagaggaaacctattcgcgtcttgtcg
ctgtttgatggcattgcgacaggtctgctggtgctaaaggaccttgggattcaggttgag
cggtacattgcctctgaggtgtgtgaggactcaatcactgtggggatcgtccgacaccag
ggcaggatcatgtatgtcggggatgtgagaaatgtcacacgcagacatctacatgaatgg
ggcccctttgacttggttattggaggaagcccatgcaacgacctttccatcgtcaaccct
gcaaggaagggtctatttgaggggacaggtcgtctgttttttgagttctaccgccttctt
cacgaagcgagacccaaggaaggcgacaacaggcctttcttctggctcttcgagaatgtg
gtggcgatgggtgtcagcgacaagagagacatctcccgcttcctcgagtgtaacccggtg
atgattgatgccaaggacgtgtcagccgcccaccgagcccgctacttctggggtaacctt
cctggtatgaacaggttggtgagagaacgaccgctggtggcaatgatcaacgacaagctc
gacctgcaggactgtctggaacatgggagaacagccaagttcagcaaagtgagaaccatc
accactaggtcgaattctatcaagcagggcaaagaccagcacttcccagtctacatgaac
gagaaggaggacattctgtggtgcactgagatggagagggtgtttggattccctgtccat
tacacagatgtctccaacatgagccgccttgccagacagagactcctgggaaggtcctgg
agtgtcccagtcatccgtcacctgtttgcaccactgaaagagtactttgcatgtgtttag
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