Polyodon spathula (Mississippi paddlefish): 121315846
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Entry
121315846 CDS
T07273
Name
(RefSeq) estrogen receptor-like isoform X1
KO
K08550
estrogen receptor alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315846
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121315846
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121315846
Nuclear receptors [BR:
pspa03310
]
3. Estrogen like
3A. Estrogen receptor
121315846
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Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121315846
NCBI-ProteinID:
XP_041106272
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Position
5:31770467..31819755
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AA seq
534 aa
AA seq
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MYLEESRTSATVNYMDNKYEFALASSAAAPLYNPSNLAYHTAPLESNSLAPEGNLHSLGN
VPMSPLVFLLSNPQLSTFIHHHHHQSQQLPYYPTDDQSSYRLREATPKPIFMPNMGCRHD
GVREQLSNMGQKCSRSSGPSKLSKEMRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
NDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGVRKGHRGRHMLKVKCKAGEQVE
KSHVDNVDRRLTLDLKPTPVNSGKKNRTLDLSVDQILLHLLEAEPSTQYSKQSHNKPFTE
VSMMSLLTSLADNELVHMIAWSKKIPGFVDLTLHDQVQLLECSWLEVLIIGLIWRSVESP
GKLLFAPDLSIDRNEGSCVEGLVEIFDMLLATASRFCTLRLKHEEYVCLKAIILLNSVLQ
INSSGHHSSAFSVLSSTNEALHDSQTIQLLLDKITDTLIHFIAKSGLPLQQQSRRQAQLL
LLLSHVRHMSIKGIEHLYNIKCKNIVPLYDLLLEMLDAHRLHFLGGSELEKATR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtacttggaagagagcaggaccagtgctactgtcaactatatggataacaaatatgag
tttgctttggcttcttctgctgctgcccctctctacaacccctccaacctggcgtatcac
actgctcccctggaatccaacagcttagcccccgaaggaaacctacattccctgggaaac
gtaccaatgagcccccttgtgttcctgctatccaacccacagctttccactttcattcac
caccatcaccatcaaagccagcagttaccctactacccgacggatgaccagagcagctac
cggctaagggaagccacccccaaacctattttcatgccaaatatgggatgcagacatgac
ggtgtcagggaacagctctccaacatggggcagaaatgcagtcgatccagcggcccatcc
aaattgagcaaggagatgaggttctgtgcggtgtgcagtgactatgcctccggctaccat
tatggagtctggtcttgtgaaggctgcaaggccttctttaagagaagcatccaaggacac
aatgactacatgtgcccagctacaaaccagtgcaccatcgacaaaaaccgaagaaagagc
tgccaggcgtgccggctgcgcaagtgctatgaagtcgggatgatgaaaggcggagtgcgt
aaaggccacaggggacgacacatgctgaaagtaaagtgcaaagcaggtgagcaggttgag
aagagccatgtcgacaacgtggacagaaggctaaccctggacctgaagcccacacctgtc
aacagtgggaagaagaaccgcacactagatctatcggttgatcagatcctcttgcatttg
ttagaagcggaaccgtcaacacagtactcaaaacagagccacaacaaacccttcactgag
gtttccatgatgagtctactcaccagtctggctgacaacgaactggttcacatgatagca
tggtcaaaaaagataccagggtttgtggatttgacgctccatgatcaggtgcagctgctg
gaatgctcttggttagaggtcttaataattggtcttatctggcgctctgtggaatcccct
gggaagttactttttgccccagatctgtccattgacaggaatgaagggagctgtgttgag
ggactggtggagatattcgacatgctccttgcaaccgcatctcgtttttgtactctgaga
cttaaacatgaagagtatgtgtgtctcaaggctatcatcctgttaaactctgttttgcag
atcaattcaagcgggcatcattcaagtgccttttccgttctctccagcaccaatgaggct
ctgcatgatagccagaccattcagctactactggataaaatcacagacactctcatccat
ttcatcgccaaatcaggcttacctctgcaacagcagtctagaagacaagcccagctcctc
cttcttctctcacatgtccgccacatgagcatcaaaggcatagagcacctgtacaacata
aagtgcaagaacatagtccccctctatgatttactgctggagatgctggatgcacaccga
cttcatttcctagggggcagtgagctggagaaagcaacaagatga
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