Polyodon spathula (Mississippi paddlefish): 121316966
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Entry
121316966 CDS
T07273
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121316966 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121316966 (esr1)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121316966 (esr1)
Nuclear receptors [BR:
pspa03310
]
3. Estrogen like
3A. Estrogen receptor
121316966 (esr1)
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GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
121316966
NCBI-ProteinID:
XP_041108348
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Position
6:18873617..18906916
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AA seq
575 aa
AA seq
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MARPPYSNTPGVPLQLKIEVRELEAFSSSPNKLPPDRALSEMYLEENRTGAAVTYLDNTY
EFATAAAAPLYSPSNLVYHSAPLESHSSAPEGNLHSQGNVPTSPLVFLPSNPQLSPFIQH
HHHHSRQVPYYLENDQGNYRLREATPEPIFRPNMGGRYQVVREQLSDMEQKGSPSSGPSK
LSKEMRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSC
QACRLRKCYEVGMMKGGVRKDHRGRHMLKVKRKASEQDEKRHVNGHNRRLTLTLEPTPVN
NGKKNSALGLSVDQVLFHLLEAEPPTQYSRQNHNTPYTEASMIHILTSLADKELVHMIAW
AKKIPGFVDLSLHDQVQLLECSWLEILMIGLVWRSVESPGKLIFAPDLAFDRNEGSCVEG
MMEMFDMLIATTSRFFTLKLKNEEYMCLKAIILLNSVLKIDSSGHQSSAFPFISSSMETL
NDSQTIQQLLDKITDALIHVIAKSGLPPQQQSRRQAQLLLLLSHVRHMSIKGMEHLYTMK
CKNIVPPYDLLLEMLDAHRLHCPGNSEPEKQQVDK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggccaggccaccatacagcaacaccccaggagtaccgctgcaactcaagattgaagtg
agagagttggaagcattcagcagctcacccaacaagctgccccctgacagagccctgagc
gagatgtacttggaagagaacaggacgggtgctgctgtcacctatctggataacacgtat
gagtttgctacggctgctgctgcccctctctacagcccctccaacctggtgtatcactct
gctcccctggaatcccacagctcagcccccgaaggaaacttgcattcccagggcaacgta
ccaacgagcccccttgtgttcctgccatcgaacccacagctttcccctttcattcagcat
caccaccatcacagccgacaggtaccctactacctggagaatgaccagggcaactaccgg
ctgagggaagccacccctgaacctattttcaggccaaatatgggaggcagatatcaggtt
gtcagagaacagctctcagacatggagcagaaaggcagtccatccagcggtccgtccaaa
ttgagcaaggagatgaggttctgtgctgtgtgcagtgactatgcctccggctaccattat
ggagtctggtcctgtgaaggctgcaaggccttctttaagagaagcatccaaggacacaat
gactacatgtgcccagctacaaaccagtgcaccatcgacaagaaccggagaaagagctgc
caggcgtgtcggctgcgcaagtgctatgaagtcgggatgatgaaaggcggagtgcgtaaa
gaccatagggggcgacatatgctgaaagtgaagcgcaaagcaagtgagcaggatgagaag
aggcatgtcaatggccataacagaaggctaactctgaccctcgagcccacacctgtcaac
aatgggaagaagaacagcgcactgggtctatcggtggatcaggtcctcttccatttgtta
gaagcagaacctccaacacagtactcaagacagaaccacaacacaccatacactgaggct
tctatgatacatatacttaccagtttggctgacaaggaactggtacacatgatagcatgg
gcaaaaaagataccagggtttgtggatttgtcgctccatgaccaggtacagctgctggaa
tgctcttggttagaaatcctaatgatcggtcttgtctggcgctctgtggaatcccctggg
aagttaattttcgccccagacctggcctttgacagaaatgaaggaagctgtgtggaagga
atgatggagatgttcgacatgctcatcgccaccacgtctcgtttttttactctgaaactc
aaaaatgaagaatacatgtgcctcaaggctatcatcctgttaaactctgttttgaagatc
gattcaagtgggcatcagtcaagtgcctttccctttatctccagctccatggagactctg
aatgacagccagaccattcagcaattactggataaaatcacagatgctcttatccatgtc
atcgccaaatcaggcctacctccacaacaacagtccagaagacaagcccagctcctcctt
cttctctcacacgtccgccacatgagcatcaaaggcatggagcacctgtacaccatgaag
tgcaagaacatagtccctccctatgatttgctgctggagatgctggatgcgcaccgactt
cattgcccagggaacagtgagccagaaaagcaacaagttgacaagtga
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