Polyodon spathula (Mississippi paddlefish): 121318406
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Entry
121318406 CDS
T07273
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03020
RNA polymerase
pspa04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121318406 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121318406 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121318406 (polr3b)
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121318406 (polr3b)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
121318406 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
121318406
NCBI-ProteinID:
XP_041110959
LinkDB
All DBs
Position
7:complement(24835816..24870451)
Genome browser
AA seq
1132 aa
AA seq
DB search
MDVLAEEFGDMRPEQLAAPVNTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMI
ANEKVTSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLMGKTPAEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVDIDRKGTVGASVTSSTHEKKSRTNITVKQGRFYMKHNTLSEDAPIAIIL
KAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALRYIGNKIRRQRMWGGP
KKTKMEEARELLASTVLSHVPVKEFNFRAKCIYMAVMVRRIILAQGEHKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDVVKHMRQDQITNGMVTAISS
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPNVFLVFL
NGNILGVIRDHQKLVSTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKK
GNPAVTNKHIEELTQGYRNFEDFLHESLVEYLDVNEENDCSIALYEHMITKYTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIAYNQRNRIDTLMYLLAYPQKPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYRNAKCVLKR
YTNQTFDKVMGPMLDAATRKPIWRHGILDADGICSPGEKVENKQVLVNKSMPTVTQTPLE
GSAQPQQPQFRDVPITYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLVRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIVPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcctcgcagaagaattcggggacatgcgccccgagcagcttgcagctccagta
aatacagttgaggagaaatggaagttgttaccagccttcctgaaggtgaaaggacttgtg
aaacagcacatcgactccttcaactattttattaacgtggagataaagaaaatcatgatt
gctaatgaaaaggttacaagcgatgcagatccaatgtggtatttaaagtacctcaatatt
tatgtgggcatgcccgatgtagaggaaagcttcaatgtaacaagaccagtatctccacat
gagtgtcgtctgagagacatgacctactctgccccaattacagtggatattgagtatacc
cgaggaagtcagaggatcattcgcaatgccttacccattggcagaatgccaatcatgcta
cgtagctccaactgtgttctcatggggaaaactccagctgagttttctaagctaaatgaa
tgccctcttgatccaggggggtactttatcgtgaaggggcaggaaaaggtcattttaatt
caggagcagctctccaaaaaccgaattattgttgacattgacaggaaaggaacagtgggg
gcctctgtgaccagctccacccatgagaagaaaagcagaaccaatataactgtaaagcag
ggaaggttctacatgaaacacaacaccctgtcagaagacgcccctattgcaatcatctta
aaggccatgggggtggagagtgaccaggagattgtccagatgattgggactgaggagcac
gtgatggcggccttcgcccccagtctggaggagtgtcagaaagcccagatcttcacacag
acacaggctttaaggtatattggaaacaagattcgaaggcagcgcatgtggggcggacca
aagaaaacaaaaatggaagaggcacgagagcttctggcttcaaccgttcttagccatgta
cctgtgaaagaatttaacttccgtgcaaaatgtatttacatggcagtgatggtccgcagg
atcattttggctcaaggcgaacacaaggtggatgacagggattattatggaaacaaacgt
ctggaattagcaggacaattgctctccctcttgtttgaagatctgtttaaaaagttcaac
tctgaactaaagaagatttcagaccagattattcccaagcagagagcagctcagtttgat
gtagtgaagcacatgagacaggatcagatcaccaatggcatggtcactgcaatctcttct
ggaaactggtcattgaagagattcaagatggatcgtcagggagtgactcaggtgctgtct
cggttgtcttacatctcagcactaggcatgatgactagaatctcatcccagtttgagaag
accaggaaagtgagtggccctcgctccctgcagccatcgcagtggggaatgctgtgtccg
tctgacactcctgaaggagaggcttgcggtctagtaaaaaaccttgctttgatgacccat
atcactactgacatggaagatgggcctattattaaattggcttttaacctcggggtggaa
gatgtgaatctgctgtgtggtgaagagttgtcctatcccaacgtgttccttgtctttctg
aacggcaacatccttggggtaatcagggaccaccagaagctagtgtccacctttcgactg
atgaggcgagctggcttcattaacgagtttgtgtctatctccacaaacctcactgatcgc
tgtgtttatatctcctctgatggcgggagactgtgcaggccttacataatcgtaaagaaa
ggaaaccctgcagttacaaacaaacacattgaagaactcacgcaggggtacaggaatttt
gaagattttcttcatgaaagcttggttgaatacctagatgtcaatgaagagaatgattgc
agcatagcactgtatgaacacatgattaccaaatatacgacacacttggagatcgagcca
ttcacactgcttggtgtttgtgctgggcttattccataccctcatcacaaccagtcccca
agaaacacataccagtgtgctatggggaaacaagctatgggcacaatcgcctacaaccag
agaaaccgaattgacaccctcatgtacctattagcctatccacaaaaacccatggttaag
acaaaaaccattgaactcattgattttgagaagcttccagcaggacagaatgctactgtg
gcagtgatgagctacagcggctatgatattgaagacgcacttgttctgaataaggcctct
ttggatagaggttttggaagatgccttgtataccggaatgccaagtgtgttcttaaacgg
tataccaaccagacctttgataaggtaatgggcccaatgttggatgcagctacgcgaaaa
ccaatctggcgtcatgggatccttgatgcagatggaatctgctctccaggtgagaaggtg
gagaataagcaggtcttggttaataagtctatgcccactgttacccagacccctctggag
ggcagtgcccagccccagcagccacagttcagagatgtgcccatcacatacaagggatca
acagactcctatattgaaaaggtgatgatttcctcaaatgcagaagatgccttcttgatt
aaaatcttgctaaggcaaaccagacggccagaaattggtgataaattcagcagtcgtcac
ggccagaaaggggtctgtggtttgattgtccctcaggaagatatgccattctgcgacact
ggaatctgccctgatatcattatgaatcctcatggtttcccatcccgcatgacggttgga
aaactgattgaattgctggctggcaaggctggtgttttggatggcagatttcattatgga
acagcctttggtggcagtaaagttaaggatgtttgtgaggatcttgttcgctatggctac
aactatttgggaaaagactatgtgacatctggtattacaggagaaccattggaagcatac
atctactttggccctgtttactaccaaaagctgaaacacatggtgctagacaagatgcat
gccagagctcgaggacccagagcagtcctcaccaggcaacccacggagggcagatcacga
gacggtggtttgcgtttgggtgaaatggagagggactgtctcattggttatggagccagc
atgctgctgctggagaggctgatgatttccagtgatgcatttgaggtggatgtgtgtgga
caatgtggtttgctgggatattcaggatggtgtcattactgcaagtcttcctgtcatgtg
tcttcactgcgcatcccttatgcatgtaaactgctattccaggaacttcagtctatgaac
attgtgcccagattgaaactgtccagatacaacgaatga
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