Polyodon spathula (Mississippi paddlefish): 121322406
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Entry
121322406 CDS
T07273
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121322406 (lcmt2)
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
121322406 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
121322406 (lcmt2)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121322406 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_4
Kelch_3
Kelch_5
Kelch_2
Kelch_6
Kelch_1
RAG2
Motif
Other DBs
NCBI-GeneID:
121322406
NCBI-ProteinID:
XP_041118254
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All DBs
Position
10:complement(44754522..44762443)
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AA seq
704 aa
AA seq
DB search
MLCEERRSNSKKQQFGKDTAVQGTNDSSIVSKCSAAARGYFHDDFLKSFVMKTARRAPLI
NRGYYIRAKAVDHCLMEFLQRTQSCTRRQLLSLGAGFDTLYFQLKVGGELRGAVVFEVDF
PDVAQRKAALINRDPALREILGTTESAASQHSPLVLSSADYRLVGVDLKALGGLESALKE
AGLQTSTPTLLLSEVVLTYMDNTRSEALIQWASALFPSSVFVMYEQLHPHDPFGRVMQQH
FLQLNSTLHALSRYPDKQAQRQRFLDRGWEECVCVDMNQFYFEFLSEEERSRLERLEPFD
EYEEWHLKCSHYFILAASKGELTHQPLICPPCESPVPALVPALSSQLLPVSVVPLEPEGV
GLCCTGLPGSGVGCTDLSESGLGCTGLAGFGLGCASLWPGSAVLVTGGAGRHGRGAQTRI
LIRDKAVWKCACPRGTELGGRMFHTVTPVPGQRCVVFGGRASPLRPATSVLSVSWDPTTP
TDPKLSVSELNCSGTAPRPRWRHSATLLTFRGESYLFVFGGRSTEERALQDWHFLKLEEN
TWTQVPVGGAVPEPRHSHSACPYAGGLVIAGGLGGQNPLGSTVLLRPAQSGFHWHELKTE
PPIIPRYSHTAHVIGDRLVLVGGVWIQADGVPGVAVINLTTGGSREYSIDTVAVPWPLML
HSHSSELLDGGREVLLIGGGGNCFSFGTHLNPRPVTLDLSPALD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgaggagaggcgctctaacagcaagaagcagcagttcgggaaagacacggct
gttcagggcaccaatgacagcagcatcgtcagtaagtgttcagcggctgcgcgcgggtac
ttccacgatgacttcctgaagagcttcgtgatgaagaccgcccgccgcgcgcctctcatc
aacaggggttactacatccgagcgaaggctgttgatcactgtctgatggagtttctgcag
cgaacgcaatcctgcaccaggagacagctgctgtccctgggagctgggttcgacaccttg
tatttccagttgaaggtggggggagagctgaggggtgctgtggttttcgaggtggacttc
cccgacgtggcacaacgcaaagccgccctgatcaacagagaccccgccctgagagaaata
ctggggaccacagagtctgctgcatcacagcacagtcccctggtgctcagcagcgcagac
tacagactggtgggtgtggatctgaaggcactgggaggactagagagcgctctgaaagag
gcagggctgcagaccagcacccctactctgctcctctctgaggtggtgctgacatacatg
gacaacaccaggtctgaagctctgatccagtgggcgtctgctcttttcccctcctccgtg
tttgtgatgtacgagcagctccacccacacgaccccttcggaagggtcatgcagcagcac
ttcctgcagctcaactccactctgcacgcgctcagtcgttacccagacaagcaggcccag
aggcaacggttcctggacaggggctgggaggagtgtgtgtgcgtcgacatgaaccagttc
tacttcgagttcctgagtgaagaggaacgcagtagattggagcgtctggagcccttcgat
gagtatgaggagtggcacctgaagtgctcgcactatttcatcctggctgcatcgaaagga
gagctgacgcaccagcccctgatctgccccccttgtgaatctccagtcccagcactggtg
ccagcactcagctcccagttgctcccagtctctgttgtacccttggagcctgagggagtt
ggactgtgctgtactggcctgcccgggtctggagtgggttgtactgacctgtctgagtct
ggactgggttgtactggtctggctgggtttggactgggctgtgcttccctgtggcccggc
agcgctgtgttggtgaccgggggggcaggaagacacggccgaggagcccagactcggatc
ctcatcagagacaaggctgtctggaaatgtgcctgtcccaggggcacagagttgggtggc
aggatgttccacacggtgacgcccgttcctggtcagcgttgtgtggtgtttggggggcgc
gcgtcccccctgcgccctgctaccagtgtgctaagtgtgagctgggaccccacgacccct
actgaccccaagctgagcgtcagcgagctgaactgtagtggcactgcgcccagaccaagg
tggaggcacagtgcgacactgctcaccttcagaggggagagctacctgtttgtgttcgga
gggcgctccaccgaggagcgggctcttcaggactggcacttcctcaagctggaggagaac
acctggactcaggtgcctgtagggggcgctgtgcccgagcctcgtcactcccactccgcc
tgtccctatgcgggggggctggtgattgcaggggggctgggggggcagaacccgcttgga
tccacggtgctgctcagacctgcccagtccggcttccactggcacgagctgaagactgag
ccgcccatcatccccaggtactctcacacggctcatgtgattggtgatcggctggtgctg
gtgggcggagtttggatccaggctgacggggtgccgggagttgcggtgatcaacctgacc
acaggaggcagcagagagtacagcatcgacacggtggcagtgccctggcccctcatgctg
cactctcatagttctgagctcctggatggagggagggaggtgctgctgattggaggaggg
ggaaactgcttctcattcgggactcatctgaacccaagacctgtaaccctggacctgagc
cctgccctggactga
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