Polyodon spathula (Mississippi paddlefish): 121325662
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Entry
121325662 CDS
T07273
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121325662 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121325662 (mmp2)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
121325662 (mmp2)
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M10
121325662 (mmp2)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_4
Reprolysin_3
DUF4953
Motif
Other DBs
NCBI-GeneID:
121325662
NCBI-ProteinID:
XP_041124442
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Position
13:complement(42827567..42841059)
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AA seq
654 aa
AA seq
DB search
MRSAFQPKHLLNVFLVQFFVLQQTSAAPSPIIKFPGDEKPKTDKEIALHYLNKFYGCPQD
RCNLMVLKDTLKTMQKFFSLPETGEIDQKTVEVMKKPRCGVPDLANYNFFARRPKWEKTG
ITYRILGHTPDLDEEVVDDAFARAFQVWSNVTPLKFTRIMDGEADIMINFGRWEHGDGYP
FDGKDGLLAHAFAPGPGVGGDSHFDDDEHWTLGEGQVVKVKYGSADGEFCKFPFLFMGKE
YNTCTSEGRDDGFLWCSTTYNFDDDAKYGFCPHELLFTLGGNAEGAPCKFPFNFQGTKYE
SCTTEGRTDGYRWCGTTEDYDKDKTYGFCPETAMSTVGGNADGSPCVYPFTFLGKTYDSC
TSEGRSDGKMWCATTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSHDPGALMAP
MYTYTKNFRLSNDDIKGIQELYGAPTDRALPPTQGPVTPMDLCQEDIVFDAVAQIRGETF
FFKDRFLWRTTNPRGKPTGPMLVATFWSELPETIDAVYEIPQEEKTVFFAGNKYWVYLAS
NLESGHPKKISSLGLPADLDHVDAAFSFQKNKKTYLFAGDKFWRYNEVKKKMDPGFPKFI
ADAWNGVPDSLDATFQFNGDGFTYFFKDWYYLKMDDTNLKIVKVGSVKSDWLGC
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgcttttcagcctaaacaccttttaaatgtgtttctcgtccagttctttgtt
ttgcagcaaacttcagctgcaccctcaccaatcataaagttccccggagatgaaaaacca
aaaacagacaaagagattgcactgcactatttgaacaagttctatggctgcccacaagac
cgctgcaacctcatggtgctcaaggacaccctgaagaccatgcagaagttcttctcactg
ccagagacaggggagattgatcagaagacggtggaggtgatgaagaaacctcgctgtgga
gttccagacctagctaattataacttctttgccaggaggcccaagtgggaaaagacgggc
attacctacaggattctggggcacacgcctgacctggatgaagaggtagtggatgatgcc
tttgctcgcgcctttcaagtgtggagtaacgtgacgccgctgaaattcacaaggatcatg
gacggggaagctgatatcatgatcaacttcggacgctgggagcacggggatggctacccc
ttcgatgggaaggatggtctgctggctcatgccttcgcccccggcccaggcgtgggtgga
gactcccactttgacgacgatgaacactggaccctcggagaaggacaagtggtgaaagtg
aagtatggaagtgcggatggtgaattctgcaagttcccgttcctcttcatggggaaggag
tacaatacctgcacatctgaggggcgggacgacggcttcctgtggtgctccacaacctac
aacttcgacgacgatgccaagtacgggttttgcccccatgaactgctgttcactctggga
ggcaatgccgagggcgccccctgcaagttccctttcaatttccaaggcaccaaatacgag
agctgcaccacggaggggcggactgatggctaccgctggtgcggcaccacagaagattac
gacaaggacaagacctacgggttctgtccagagacagccatgtccaccgtgggagggaat
gctgatggctctccctgcgtctaccccttcaccttcctgggaaagacctacgactcgtgc
acctctgaggggcgcagcgacggcaaaatgtggtgtgcgaccacgaagagctacgatgac
gaccgcaagtggggcttctgccctgatcagggttacagtctcttcctggttgctgcccat
gagtttggccatgccttgggtctggagcattcccatgatccgggggccttgatggctccc
atgtacacgtacactaagaacttccgcctctccaacgatgacatcaaaggaattcaggag
ctctacggagcaccaacggatagagccttaccaccgacccagggcccggtcactccgatg
gatttgtgccaggaggacattgtcttcgacgccgtggcccagatcagaggagaaacgttc
ttcttcaaagacagattcctatggaggaccaccaatcccaggggaaagcccacaggcccc
atgctcgtggccaccttctggtctgagctgccagaaaccattgatgctgtgtatgagatc
cctcaggaggagaagactgtgttcttcgcaggcaataagtactgggtctatttagccagc
aatctggagagcgggcatccaaagaagatctcatccctggggctgcctgctgatctggac
catgttgatgctgctttctccttccagaagaacaagaagacctacctcttcgcaggggac
aagttctggagatacaacgaggtgaagaagaagatggaccctggcttccccaagttcatt
gcagatgcctggaatggagtgccagacagtctagacgctaccttccagtttaatggcgat
ggtttcacatacttctttaaggactggtactatctgaagatggatgacaccaatctgaag
attgtgaaagtgggaagtgtgaagtctgactggctaggctgctga
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