Polyodon spathula (Mississippi paddlefish): 121326046
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Entry
121326046 CDS
T07273
Name
(RefSeq) uncharacterized protein LOC121326046 isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250
Viral life cycle - HIV-1
pspa03260
Virion - Human immunodeficiency virus
pspa04060
Cytokine-cytokine receptor interaction
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121326046
03260 Virion - Human immunodeficiency virus
121326046
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121326046
04514 Cell adhesion molecules
121326046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121326046
CD molecules [BR:
pspa04090
]
Proteins
121326046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
I-set
Ig_2
Izumo-Ig
Flo11
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121326046
NCBI-ProteinID:
XP_041125128
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All DBs
Position
13:27572057..27633380
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AA seq
491 aa
AA seq
DB search
MCLYERKTVFVSLWVWCTVALDAVAASENMFGVVDEKVEIPCETLADRKFNVVWSFGKQE
NIQSQNIIKQFHIGGVRKDLSDIAKRSTLSNQENSLIISPAKADDEGYFKCELSWDTGRK
QHKYRLRLLKVRADPSGPVFSSQNVTLTCDVGDTSGLTINTSWLDPKGNQVTDSRKQENK
LVLNKLTAKNSGDWKFRVEYNNKIVEATYRIVVIGFVDPQPVIRYTRPRASVLLPCLIDQ
VMGTVKWDQVISAGLRGVEWSFIPDIAEERKILSLNMTETGVLKTILVQNYRFSSSISER
NPMNFSLLISEVRPADEGEYRCQVQFQGQNLMAVVHLEILKVISEPKGPIVERTGVNLSC
VVRKEATGFRVEWSAARGPTQEVHTHAVAGGLALRVDSLTKEKAGPWKCSVFIKEDLQTS
LEYTIITARPPVDVWLVLLVGGTVLLCALLVLLIYCFVRRRPANPMHRKPRRGRTKYCKC
KHPQPKAFYRA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgtacgagaggaagactgtattcgtgtcgctgtgggtctggtgcacagtggcc
ctggatgccgtggctgcctctgagaatatgtttggggtcgttgatgagaaggtggagata
ccctgtgagaccttggccgatagaaagttcaatgtggtgtggtctttcggaaaacaggag
aacattcaatcacagaacattatcaaacaatttcacattggaggtgtgagaaaagacttg
agtgacattgccaagagatcaactctgagtaatcaggaaaactccctcatcatcagtcct
gcaaaagcagatgatgaaggctatttcaagtgcgagctgtcgtgggataccggtagaaaa
cagcacaagtacaggctgcgtctgcttaaagtccgtgcagacccatccggccctgtcttc
agctctcagaatgtgactctgacctgcgatgtcggggacacttctggcttgaccatcaat
accagctggctcgaccccaaagggaatcaggtgacagattcaaggaagcaagaaaataaa
ctggtgcttaataagttaactgcgaagaattccggggactggaaattccgagtagaatac
aacaacaagattgtggaggccacatacaggatagtggtcataggtttcgtcgacccgcag
cctgtaattagatacacccgtcctcgagccagcgtgctcctgccctgcctgattgaccag
gtgatgggtacagtgaagtgggaccaggtcatcagtgctggcctgcgaggggtggagtgg
agcttcattccagacatagccgaagagagaaaaatattgtctctgaacatgaccgagaca
ggcgtcctcaagacgatcctggtgcagaactacaggttcagttccagcatctctgagagg
aaccccatgaacttctctttgctcatttcggaagtcagaccagcggacgagggggagtac
cggtgccaagtccaattccaaggacaaaatttgatggccgtggtgcatctggaaatcctg
aaagttatctctgagcccaaaggccccatcgtggagaggacgggagtcaacttgtcctgc
gtagtccggaaagaggccacagggttccgagtggagtggagcgcagccaggggccccaca
caagaggtccacacccacgccgtggctggaggactggcgctacgagtggacagcttgacg
aaggaaaaggcagggccgtggaagtgcagcgtgtttatcaaggaagacctgcagaccagc
ctggagtacacgatcattacagcgaggcccccagtagacgtgtggttggttctgctggta
gggggcactgtgctgctctgcgctctcctggtcctgcttatctactgcttcgtcaggagg
cgccccgcgaaccccatgcacagaaaaccaagaagaggccgaacaaagtattgtaaatgc
aagcatccccaaccaaaagcgttctaccgagcttga
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