Polyodon spathula (Mississippi paddlefish): 121326442
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Entry
121326442 CDS
T07273
Symbol
chrnd
Name
(RefSeq) acetylcholine receptor subunit delta isoform X1
KO
K04816
nicotinic acetylcholine receptor delta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121326442 (chrnd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121326442 (chrnd)
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121326442 (chrnd)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF5860
Ferlin_C
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
121326442
NCBI-ProteinID:
XP_041125642
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All DBs
Position
14:39847665..39854287
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AA seq
525 aa
AA seq
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MRALYFYLSIALVLSLCVSGSTARNQEERLLNHLFKERAYNKELRPVQSQDDVVDVYLAL
TLSNLISLKEVDETLTTNVWIEHGWYDHRLSWNASEFDDISILRLPPRQVWLPEIVLENN
NDAQFQVAYYCNVLVDPSGYMYWLPPAIFRSSCAINVNFFPFDWQNCSLKFSSLTYNAKE
IRMHLKVDTDPDTEENFPVEWIIIDPAGFTENGEWEIIHKPARKNVHKDVPLDSNKHQDI
TFYLIIKRKPLFYIINIIIPSILISFMASLVYYLPADSGEKMTLSISVLLAQSVFLLLVS
QRLPETSMAIPLIVKYLMFIMVLVTVVVLNCVIVLNLHFRTPSTHVMSDWTKELFLERLP
RLLHMSRPADSNPQWDGALQRRSSSVGYIAKAEEYFTVKSRSELMFEKQSERHGLTSRAT
PAAAHRPNAKSELDMTDQLFAEMKPAVEGANYIVKNMKDKNDYNEEKDNWNRIARTVDRL
CLVLLTPVMILGTIVIFFMGMYNHPPPLPFEGDPYDYQESSRRVI
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagagcactttatttttatctgtccattgctctggtgttgagcctttgcgtgtcaggc
agcactgcccggaatcaggaggagcggctcctcaatcacctgttcaaggagcgcgcctac
aacaaggagctgcggcccgtccagtcccaggacgatgtagtggacgtgtacctggctctg
accctctccaacctcatctctctgaaagaagtcgatgaaacgctaaccacaaacgtatgg
atagagcatggctggtatgaccacaggctgtcctggaatgcgagtgagtttgatgacatc
tccattctgaggctgcctcccagacaggtgtggctcccagagatcgtcttggagaacaat
aacgatgcccagttccaggttgcctattactgtaatgtgctggtggacccctctggctac
atgtactggctccctcctgcgatcttccggagctcctgtgctatcaacgtcaacttcttt
cctttcgactggcagaactgctccctcaaattcagctctctgacatacaatgccaaggag
ataagaatgcacttgaaggtggatacagacccagacactgaggagaacttcccagtggag
tggattatcattgatcctgctggcttcacagagaatggcgagtgggagattatccacaaa
ccagccaggaagaacgttcacaaagacgtccctctggacagcaacaagcaccaggacatc
accttctacctcatcatcaagcgcaagcctctgttctacatcattaacatcatcataccc
agcatcctcatctccttcatggcatcgctggtgtactacctcccagcagacagtggtgag
aagatgactctatcgatctcagtgctcctcgctcagtctgtgttcctgcttctggtctcg
cagcgactacccgagacctcgatggccatccccctcatcgtcaagtatctgatgttcatc
atggtgctggtcacagtggtggtgctgaactgcgtcatcgtgctgaaccttcacttccgc
acgcccagcacacacgtcatgtcagactggaccaaagagttattcctggagcgcttgccc
aggctgctgcacatgtcccgcccggcagactctaatccgcagtgggatggagccctgcag
cggcgcagcagctctgtgggatacatcgccaaagcagaggagtacttcactgtcaagtcc
cgcagcgaactcatgtttgagaagcagtctgaaaggcacggtctgaccagccgtgccact
cctgctgcagcacacagaccaaacgccaagagtgagttggacatgactgaccagctgttt
gcggagatgaagcctgcggtggaaggggcgaactatatcgtcaagaacatgaaggataag
aacgattacaatgaggagaaggataactggaaccgcattgcaaggacagtggaccgactc
tgtctcgtcctgctgacgcctgtcatgatcctggggaccatcgtcatcttctttatgggg
atgtacaaccaccctccgcccctgccctttgaaggggacccctacgactaccaggagagc
agcagacgagtcatctag
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