Polyodon spathula (Mississippi paddlefish): 121326488
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Entry
121326488 CDS
T07273
Name
(RefSeq) paired box protein Pax-3-A-like isoform X1
KO
K09381
paired box protein 3/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121326488
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121326488
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_23
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121326488
NCBI-ProteinID:
XP_041125703
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Position
14:36341738..36366557
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AA seq
482 aa
AA seq
DB search
MAALAGAIPRMMRPAPGQNYPLSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVEKRIEE
YKKANPGMFSWEIRDKLLKDGICDRNTVPSVSSISRIMRSKSGGRGDDEEEEDEEEIERK
EFEEHEKKTKHSIDGILGDRSSHSEEGSDIESEPDLPLKRKQRRSRTTFTAEQLEELERA
FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPS
AMPALQQYQLSDSPYPPTSISQTVSEQSSTVHRPQPLPPTSAHQSSLNSAPESGSAYCRH
GFSGYTDSFVTSSGPSNPMNPAISNGLSPQVMGLLNPGGVPHQPQSDYAISPLTGGLEPS
TAVSASCSQRLDHMKTLDSLPNTQSYCPPTYSTSGYSMDPVASYQYGQYSQSAFHYLKPD
IA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttagctggggcgattccaagaatgatgcgcccagcaccgggacagaattac
ccactcagcggattccctctggaagtctctacccctttaggacagggcagggtgaaccag
ctcggtggtgttttcattaacggcagacctttaccaaatcacatcaggcacaagatagta
gaaatggctcatcacggcataagaccctgtgtcatctcacgccagctcagggtctcacac
ggctgcgtctccaaaatcctgtgcaggtaccaggagacaggctccatcagacctggcgct
atcggtggaagcaaaccaaagcaggggaccacgccagacgtggagaagagaatcgaggag
tacaagaaagctaacccgggcatgtttagttgggagatccgggataagttgctgaaagat
ggcatttgtgatcggaatacggtcccctcagtgagttcaatcagccgtattatgagaagt
aaatctggaggcaggggggacgatgaagaagaagaggacgaggaggaaatcgagaggaag
gagtttgaagaacatgaaaagaaaacaaaacacagtatcgacgggatactcggagacaga
tcgagccattccgaggaggggtcagatatcgaatcagagcctgacttgcccctgaagaga
aaacagcgtcgcagccgcaccaccttcaccgcagaacaactggaggaacttgagagagca
tttgagaggacacactaccccgacatctacacacgagaagagctggcacagagggccaaa
ctcacagaggctcgcgttcaggtctggtttagtaacagaagagcaagatggaggaaacaa
gcaggagccaatcagctgatggcttttaaccacctgatcccaggagggttcccaccatca
gcaatgcccgcacttcaacaataccaactgtcagacagcccgtacccaccaacgtctata
tcacaaacagtgtctgagcagagcagtacagtgcaccggccccagcctctgcctcccacc
tcggcccaccagagcagcctgaactcagcccctgaaagcggctctgcctactgccggcat
ggcttctcgggctacacagacagctttgtgacttcgtcaggaccctccaatcccatgaac
ccggccatcagcaacggcctttcacctcaggtaatggggcttctcaacccagggggtgta
cctcaccagccacagagtgactacgccatttcaccactgaccggaggccttgaacccagc
actgcagtgtcagccagctgcagtcaaagactagaccatatgaaaactctagacagcctt
cccaacacccagtcctactgccccccaacttacagcacctcaggctacagcatggaccca
gtcgcaagttaccagtatggacagtacagccagagtgcctttcattatttgaagcccgat
atcgcatga
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