Polyodon spathula (Mississippi paddlefish): 121328516
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Entry
121328516 CDS
T07273
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121328516 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121328516 (lamb2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
DUF745
F5_F8_type_C
MurB_C
EzrA
DegQ
Motif
Other DBs
NCBI-GeneID:
121328516
NCBI-ProteinID:
XP_041129144
LinkDB
All DBs
Position
16:complement(26491506..26542648)
Genome browser
AA seq
1781 aa
AA seq
DB search
MKVMKEILLLLCAFTGTLAQDPDLAHGCSQGSCYPATGDLLVGRAEKLKASSTCGLRKKE
PYCIVSHLQDEKKCFQCDSRHAYDHKYNSISHRIENVITTFKPHLKKSWWQSENGKSEVS
VQLDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQVYRYFAQDCASAFPGVSTGPL
RKVDDILCESRYSDIEPSTEGEVIYRVLDPAIRIQDPYSPLIQNLLKITNLRVNFTKLHT
LGDNLLDSRAEIKEKYYYAVYELVVRGNCFCYGHASECAPISGIRGDIEGMVHGRCVCKH
NTQGLNCEQCDDFYNDKPWRPAEGRNTNACKKCNCNSHSNRCHFDMAVFLATGNASGGVC
DNCLHNTMGRSCEMCKPFYFQDPSRDIRDPSVCVACDCDPDGSLSGGICDGHDDPTQGMI
AGQCRCKDHVEGPRCDKCKSGFFGLSTNNPKGCQPCQCDPRGTVSNGPQCDTISGDCFCK
RLVTGRSCSQCLPEHWALSHDLHGCRACDCDVGGANDNQCSMETGQCRCRTHMVGRQCSQ
VESGYYFMALDHYTYEAELARLGQGCAVVVREPQPNRPPTWTGTGFARVPEGGNLEFEIN
NIPYSMEYDVLIRYEPQFPEEWEKVQVSVIRPGAIPTSSPCGNTIPADDLLVVSLPSLSR
YVVLPQPVCLERRVSYTIRMEFPRYISRERIPNANILIDSMVLLPRYSSLEMFIGGDPIS
MNRKESYERYRCHDNNKGVIRPQPTDICAKLISSLSATIHNGALPCQCDPQGSVSSECNP
NGGQCRCRPNVFGRRCEQCAPGTYGFGPGGCKPCECSLEGSQTRFCEPLSGQCPCSPGAF
GLRCDRCQPGHWGFPNCRRCQCNGHAEECDQRTGACLTCRDNTSGDKCERCISGYYGNPV
LGSGEQCRPCPCPDGPNSGRHFASSCHQDNQNRQVICNCNQGYTGPRCDECAPGFYGNPL
QPGGRCQPCQCNNNIDIFDMNACDRRTGQCKKCLYNTEGHDCRLCRPGYYGDATRRNCRK
CTCNFLGTDRSQCSSRDQCECDRNSGQCQCLPNVTGQNCDHCVANYWNLGSGNGCDPCGC
EPNNAVSPTCNEFTGQCQCRHGFGGKTCQDCQENYWGNPSVQCRACDCDPRGIETSQCNR
VTGHCSCRQGVSGVRCDQCARGFSGQFPDCQPCHQCFGDWDRVVQDLASRTRALAARAQE
IQQTGLTGAYEKNFRELEEKLSEARVIVNARNATAQAIGDLMRLINQLRNKIDETTDSLD
KIERDLTSVQDSNFAASNDLSALEREARALNLSASELGQQLDTLKNSNFLGAYDSIRSSF
DKSRAAERRANESTVTTPSTVSQSSDTRHKTERLLAEKKNDFNKKNAANKRYLIDLAAKA
ETLDMKIINEKVCGAPGDAPCAESPCGGAGCHDDEGNRHCGGLNCNGAVATANNALERAK
YAEKELSKAMGEVDELFQKVAQAKVKADEAKVRAQAALDKANATKTKVERSNKDLRDLIK
QIRDFLTQDGADPDSIEMVASRVLELSIPASPQQIRHLAEEIKDRVSSLSNVDAILEQTN
DDVRKAEQLLQDAKRARTRAESVKNTAETVKQALEDARRAQAAAEKAIQQAKSDIGQTED
RLAQIQSETAASEKNLNDAMDRLGLLGRQIEALKTKRANNSLVASRAEETATMARDKANE
AKQLLDGELIDKYRTVQDLVDRKAKTIQEAKQKAEKLRDEAKQLLKEAQNKLQRLNDLEI
DYEENEKTLESKAKQLDGLEDKMRGILKDINQQIQIYNTCQ
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatgaaggagatactcttattattatgtgccttcacgggcaccctggcccag
gaccctgacctggcacatgggtgctctcagggaagctgctaccccgccacgggagacctg
ctggtgggccgggccgagaaactcaaggcctcctccacctgtggcttgagaaagaaagag
ccttactgcatagtcagccatctacaggatgagaagaagtgcttccagtgtgattcccgg
cacgcctacgatcacaagtacaacagcatcagccaccggatcgagaatgtcatcaccacg
ttcaagccacacctcaagaagtcttggtggcagtctgagaacgggaagtcggaagtgagt
gtgcagctggaccttgaggctgaattccacttcactcaccttatcatgacctttaagact
ttccgccctgctgccatgctgatcgagcggtctgctgatttcggacgcacctggcaggtg
tatcgctattttgcccaggactgtgcgtcagcgtttcccggagtctccacgggtcccctt
cgcaaggtggatgacatcctctgtgagtcccgttactcagacattgagccgtctacagag
ggagaggtgatttacagagtgctggaccctgccattcgcattcaggatccctatagccct
ctgattcagaacctgctaaagatcaccaatctgcgggtgaactttaccaagctgcacacc
ctgggggataacctgctggactcgcgcgcggagatcaaggagaagtattactacgccgtg
tacgagctggtggtgcgcgggaactgcttctgctacgggcacgcctccgagtgcgccccc
atctccggcatccgaggcgacatcgagggcatggttcatggcaggtgtgtttgcaaacac
aacactcagggcttgaactgtgagcagtgtgacgatttctacaatgacaagccctggaga
ccggctgaagggaggaacaccaacgcctgcaagaaatgcaactgtaatagccattccaac
cgctgtcacttcgacatggcagtgttcctggcgaccgggaacgcaagcgggggtgtctgt
gacaactgcctgcacaacaccatgggccgcagctgtgagatgtgcaaacctttctacttc
caggaccccagccgcgatatcagagacccgtccgtctgtgtggcctgtgattgtgacccc
gatggctctttgagtggagggatctgtgacgggcatgacgaccccactcagggcatgatt
gctgggcagtgccgctgcaaggaccacgtggagggcccgcgctgcgacaagtgcaaatct
ggattcttcgggctgagcaccaacaaccccaagggatgccagccctgccagtgtgacccc
cgtggtactgtgagcaacggcccccagtgtgacaccatcagtggagactgcttctgtaag
cgccttgtgaccggtcgcagctgcagccagtgcctgccggagcactgggccctgagtcat
gatctacatggttgccgagcatgtgactgcgatgtgggaggagctaatgacaaccagtgc
tccatggagacggggcagtgccggtgtcgcacgcacatggtgggccggcagtgtagccag
gtggagtccggatattatttcatggctctggaccactacacctatgaggctgagcttgca
cgactgggacagggctgtgcagtggtggtgagggagccccagcccaaccgcccccccacc
tggaccggcaccggcttcgcacgggtcccagaaggaggcaatctggagttcgagatcaac
aacattccctattccatggagtacgatgttctgatccgatacgagccacagttccctgaa
gagtgggagaaggtgcaagtctcggttatccggcctggtgctatcccgaccagcagcccg
tgtggaaacaccatccctgctgatgatctgcttgtggtctccctgccttccttgtccagg
tatgtggtgcttccccagcctgtgtgtctggagcgcagagtcagttacaccatccgcatg
gagttccctcggtacatctccagggagagaatccccaacgccaacatccttatcgactcg
atggtgctgctcccccggtactcctctttggagatgtttattggcggagaccccatctcc
atgaaccggaaggagagctatgagcgctaccgctgccatgacaacaacaagggcgtgatc
aggccacagcctactgatatctgtgctaaactaatcagcagcctgtctgccaccatccac
aacggagctctgccttgtcagtgtgaccctcagggctctgtcagttcggagtgtaacccc
aacggagggcagtgccgctgccgccccaacgtgttcggccgtcgctgtgaacagtgtgcg
ccggggacctacggcttcgggcctggtggatgcaaaccgtgcgagtgcagtctggagggg
tctcagacccgattctgtgagccactcagcggtcagtgtccatgcagcccgggagctttc
ggcctgcgttgtgaccgctgtcagcctggacactggggcttccccaactgtcgtcggtgc
cagtgtaacggccacgctgaggagtgtgaccagaggaccggagcctgtctgacctgccgg
gacaatacatccggggacaagtgtgagaggtgtatcagcggttactatggaaaccctgtg
ctgggttcaggagagcagtgccgcccctgtccgtgccctgatgggcccaacagcggacgc
cattttgcttcctcatgtcaccaggacaatcaaaacaggcaggtcatctgtaactgcaac
cagggatacacaggcccccgttgtgatgagtgtgcccctggtttctatggtaaccccttg
cagcctggtggccgctgtcaaccctgccagtgtaacaacaacattgatatctttgacatg
aacgcatgtgaccgacgcacagggcagtgcaagaagtgcctctataatacagaggggcat
gactgcaggctgtgccgtcctggttactatggagacgcaaccagacgcaactgcaggaaa
tgcacgtgcaacttcctgggcactgatcgcagtcagtgcagctctcgtgatcagtgtgag
tgtgaccgcaatagtgggcagtgccagtgtctgcccaatgtcactggtcaaaactgtgac
cactgcgtggccaactattggaacctgggcagcgggaatggctgtgatccctgtggctgt
gagcccaacaatgctgtcagccccacctgcaatgagtttactggacagtgccagtgtcgc
catggtttcggagggaagacttgtcaggactgccaggagaactactggggaaatcccagc
gtgcagtgcagagcatgtgactgtgaccctcgcgggatcgagacctctcagtgtaaccgg
gtgacggggcactgttcctgtcggcagggcgtgtcgggcgtgcgctgtgaccagtgtgcc
cggggcttctctggccagttcccggattgtcagccctgccaccagtgcttcggggactgg
gatcgggtggtgcaggacctggcgagccgcactcgagcgctggcggcccgcgctcaggag
atccagcagaccggcctgaccggcgcctacgagaagaacttccgagagctggaggagaag
ctgtccgaggcacgggtcatcgtgaacgcgcgcaatgccactgcccaggccatcggcgac
ctcatgagactcatcaaccagctccgaaacaagattgatgagacaacagactctctggac
aagatcgagagggacctgacaagcgtgcaagacagcaacttcgcagcgagcaatgatctg
agcgctctggagcgagaggcccgggctctcaacctgtctgccagcgagctcggacaacag
ctcgacacgctcaagaactccaacttcctgggtgcctatgacagtatccgcagctcattt
gataagtcccgggctgcagagcgccgcgccaatgagtccacagtcaccacgcccagcact
gtcagccaatccagcgacacccggcacaagaccgaaaggctgctggctgaaaagaagaat
gatttcaacaagaagaatgcggccaacaaacgatacctgatcgacctggctgccaaggct
gagactctggacatgaaaataatcaacgaaaaagtatgtggggcccctggtgacgccccc
tgtgctgagagcccctgtggaggagcaggttgccatgacgatgagggaaacaggcactgc
ggtggtctgaactgtaatggagcggtggcgactgcgaataatgctctggagagagccaag
tatgccgagaaagagctgagcaaggccatgggcgaggtggatgagctcttccagaaggtg
gcccaggcaaaggtgaaagctgatgaagccaaagtgagggcacaggcagcactggacaag
gccaacgccaccaagactaaagtggagcgctccaacaaagacctgagggacctgatcaag
cagatccgtgacttcctcacacaggatggggcggaccctgacagcattgagatggtggcc
agccgtgtgctggagctctccatccctgcctccccacagcagatcagacacctggctgag
gagatcaaggaccgagtcagcagcctctccaacgtggacgccatcctggaacagaccaac
gacgacgtgcgcaaagcagagcagcttctgcaggacgccaagagagccaggactcgcgca
gaaagtgtgaagaacacggcagagacagtaaagcaggctttagaagatgcccgccgtgca
caggccgctgctgagaaagcaattcagcaagccaagagcgacattggtcagactgaggac
agactggcacagatccagtcagagactgctgccagtgagaagaacctgaacgatgccatg
gaccgcctgggcctgctgggcagacagatcgaggccctgaagaccaaacgtgccaacaac
agcctggtggcgtccagggcagaggagacagccaccatggcacgggacaaagcgaacgag
gcgaagcagctcttagacggcgagctcattgacaagtacagaacggtgcaggacctcgtc
gacaggaaagccaaaaccatccaagaggccaaacaaaaagcagagaaactgcgcgacgag
gccaagcagctactgaaggaggcccagaacaagctgcagagactgaatgacctagagata
gattacgaggagaatgagaaaacacttgagagcaaagccaagcagctcgatggacttgag
gacaaaatgagagggattctaaaagacatcaaccagcaaatccaaatctacaacacctgc
cagtaa
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integrated database retrieval system
