Polyodon spathula (Mississippi paddlefish): 121328877
Help
Entry
121328877 CDS
T07273
Name
(RefSeq) transcription factor E3-like
KO
K09105
transcription factor E3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121328877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328877
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121328877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
121328877
NCBI-ProteinID:
XP_041129941
LinkDB
All DBs
Position
16:20258837..20278184
Genome browser
AA seq
455 aa
AA seq
DB search
MSSRVLLRQQLMKEQAQEQERREEQQERASSNQLRPADPSPAISVSAPQGPRAAPAQVPV
EVLKVQTHLENPTKYHIQQTQRHQVKQYLSTTMGNKAANQTLGASPSPQAGSAPELAPPT
STPNSPMALLNLGSNSEKEIDDVIDEIISLESSFNDDIMGFIDSGLQLSNTLPVSGNPMD
LYGTPSMSLPTITVSNSCPADLTKIKQEKTDTDPNASAGFCVTEVEVKAFMKERQKKDNH
NLIERRRRFNINDRIKELGTMIPKSSDPEMRWNKGTILKASVDFIRKLQKEQQRSKEMEM
KQRKLEQLNRSLLLRVQELEMQARLHGLPTLPSSLGSGEPVSQLVLQDQSQRPDHHPNTG
LLSGPFAAPPTTPAGPSPSSLVSPALDLGSLNFDNLDDPAAFDLGLTSDVGLDDILMDEG
GLSPLRRGSDPLLSSVSPGASKASSRSSFSMEEDS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgggtgctgctgaggcagcagctgatgaaggagcaggcgcaggagcaggag
cggagagaggagcagcaggagcgagcgtccagcaaccagctccgccccgccgacccctcg
cccgccatcagcgtgagtgccccccaggggccccgagccgcgcctgcacaggtcccagtc
gaggtgctcaaggttcagactcacttggagaatccaaccaagtatcacatccagcaaaca
cagaggcaccaagtgaaacagtacctctccaccacaatgggcaacaaggcagccaatcag
acattgggggcgtcgccctcgccgcaagctggctctgcccctgagctggccccgcccacc
agcactccaaacagccccatggctttgctcaacctcggctctaattcggagaaagagatc
gatgacgtcatcgatgagatcatcagtctggagtccagcttcaacgatgacatcatgggg
ttcattgattcgggactgcagctttcaaacaccctccctgtctctggtaacccgatggat
ctgtacggcacccccagcatgtcgctcccaaccatcaccgtgagcaactcctgcccggcc
gacctcaccaaaatcaagcaagagaagaccgacacagacccgaacgccagtgctggtttc
tgtgtgacagaggtcgaggtgaaagcgttcatgaaagagaggcagaagaaagacaatcac
aatctcatcgagaggcgccgaaggtttaacatcaacgacagaattaaagagttggggacc
atgattcctaagtctagcgacccggagatgcgctggaacaaaggcacaatcctcaaggct
tcggtcgacttcatccggaagctgcagaaagagcagcagcgatcgaaggagatggagatg
aagcagaggaagctggagcaactgaacaggagcctgctgctccgagtacaggaactggaa
atgcaggcccgccttcatggcctccccactctcccttcttccctgggctcgggagaaccg
gtctctcagcttgtcctgcaggaccagagccagcgtccagaccaccaccccaacaccggc
ctgctctccggccccttcgcagcccctcccaccacccctgcaggcccctccccttcctcc
ctggtcagcccagccctcgacctgggctccctgaacttcgacaaccttgacgaccccgcg
gcctttgacctggggctgacctcggacgtgggactcgatgacattctcatggatgagggg
ggcctctcgcccctgaggcggggctccgaccccctgctttcatcggtctctcctggggcc
tccaaagccagtagcaggagcagcttcagcatggaggaggactcctga
DBGET
integrated database retrieval system
