Polyodon spathula (Mississippi paddlefish): 121328930
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Entry
121328930 CDS
T07273
Symbol
si:dkeyp-61b2.1
Name
(RefSeq) tumor necrosis factor receptor superfamily member 8
KO
K05145
tumor necrosis factor receptor superfamily member 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121328930 (si:dkeyp-61b2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pspa04050
]
121328930 (si:dkeyp-61b2.1)
04090 CD molecules [BR:
pspa04090
]
121328930 (si:dkeyp-61b2.1)
Cytokine receptors [BR:
pspa04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121328930 (si:dkeyp-61b2.1)
CD molecules [BR:
pspa04090
]
Proteins
121328930 (si:dkeyp-61b2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
121328930
NCBI-ProteinID:
XP_041130009
LinkDB
All DBs
Position
16:9538743..9557088
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AA seq
523 aa
AA seq
DB search
MDWWSSRVVAVLALVVLLLEAASSEQVLFAAGFVFVTGRTSLLYPDPGGRPRSAGAVGGV
LWKPATLDLSRCPVQVSSPSPGTQSRSHCPDDLQRDCQPCKKEYYWLTRNGVPKCQPCTQ
RCSGVDELVEVVNCTLFTNRECQCRAGWFCETRAQYTCTRCQRHRQCEPGWGVLQPGNAF
TDTTCQRCPAGHHSTQTSSTERCRAHTDCASLGQAVFLQGSDTRDEVCVHAASSTPSGGA
ATGQLSTSPTTHDSTAPPTTETTEPHPPVSLTNMITPILTLPITTSSTAPPSGPKGSLQS
LAVFISISLICCLLLLLLKNRRRLGALLKHSRGMTDMKLIPQVSPSLRGERRGERLNLKA
SFILQAARPPALLEFQHKQQDCPLLAAEGERQESHEGEVRPPVEEMRPLGRAGDGAPAEL
GVSREPCSDSRVQQFIAEPKGGDSVNNNIGSIFILHPSTVILGSGRRGAERTGGGEEGPP
ISTPQQESQSPSHSQLEETCRASVCVQEEGGKDLHYPIPASGK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggactggtggagcagccgggtcgtcgcggtccttgcgctggtggtgttgctgttggaa
gcagcctcgtcggagcaggtcctttttgcagcggggtttgtgtttgtgacgggacggacc
agcctgctgtacccggacccgggggggcggccccgcagcgcaggtgctgttgggggtgtc
ttgtggaagcccgcgactctggacttgtccaggtgtcctgtccaggtgtcctctccgagc
ccaggcactcaatcaagatctcattgcccagatgacctgcagcgtgactgccagccctgc
aaaaaggagtactactggctcaccagaaacggggtcccgaagtgtcaaccctgcacccag
cgctgctcaggtgttgatgagctggttgaggtggtaaactgcactctctttactaaccgg
gagtgtcagtgccgggcgggctggttctgcgagacccgcgctcagtatacctgcacccgg
tgccagcggcacagacagtgtgagccgggctggggggtgctgcagccaggtaatgccttc
actgataccacctgccagcgctgccctgcggggcatcactccacccagacatcctccacc
gagcgctgccgagcgcacactgactgtgccagtttaggtcaggctgtgtttctgcagggc
tctgatacccgcgatgaggtctgtgtccacgctgcctcctccactccctcagggggcgct
gcaactggacagctctcaacaagccccaccacccacgactccacagcccctcccaccacg
gagaccacagagccccacccccctgtctccctcaccaacatgatcacacccattctgact
ctccccatcacaactagcagcacagcgcctccctctggacctaaaggctctctgcagagt
ctcgctgtcttcatctccatctcgctgatctgctgcctgctgctcctgctgctgaagaat
cgaaggagactgggagccctgctcaaacactcccgagggatgacagatatgaagctgatt
ccacaggtgagcccctcactgaggggagagaggagaggagagagattgaatctaaaggca
agcttcattttacaggctgcacggccgccagctctgctggagttccaacacaagcagcag
gactgccccctgctggccgcggagggggagaggcaggagagccatgagggggaagtgagg
ccccccgtggaggagatgaggcccctgggcagggctggagacggggcccccgcggagctg
ggtgtctctcgggaaccctgcagtgacagccgggtgcagcagttcattgctgagcctaaa
gggggcgacagcgtcaataacaacattgggtccatcttcatcctgcaccccagcactgtg
atcctgggctcaggcagaaggggggctgagaggacagggggaggagaggagggtcccccg
atcagcaccccccagcaggagagccagagcccgagccacagccagctggaggaaacctgc
agagccagtgtgtgtgtgcaggaggaggggggcaaggatctgcactaccccataccagcc
agcgggaagtga
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