Paenibacillus spongiae: L1F29_10250
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Entry
L1F29_10250 CDS
T09530
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00730
Thiamine metabolism
pspn01100
Metabolic pathways
pspn01240
Biosynthesis of cofactors
pspn04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
L1F29_10250 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
L1F29_10250 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspn03016
]
L1F29_10250 (thiI)
Enzymes [BR:
pspn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
L1F29_10250 (thiI)
Transfer RNA biogenesis [BR:
pspn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
L1F29_10250 (thiI)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
ATP_bind_3
tRNA_Me_trans
DUF2090
Motif
Other DBs
NCBI-ProteinID:
UVI32164
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Position
2252427..2253650
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AA seq
407 aa
AA seq
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MKVDTIMVRFGEYTTKGRNRGFFEKRIYDQVRRVLRPFAAVQMTRTYGRIYIKLNGESYE
LISAKLKHIFGIASFSPASKCESELEVIRETALEVMHSLPKKPSTFKVTMRRVDKSFPHD
SQEMNHLVGSHVLRAMPDLKVDVKNPEVELRVEIQPEGTYVFCEVVPAAGGYPYGTNGKA
VLLLSGGIDSPVAGYLAMRKGLELEAIHYHSFPFTSEKAKQKVITLAQKLADMSGVPFKL
HMVSFTEIQTAFTQCNQDHLIITLMRRAMLRIAERLAEQAGALGIVTGDSLGQVASQTLG
SMNVIGRTVELPLLRPLITTDKNEIIRIAEQIKTYATSILPYEDCCTLFVPKSPSTNPNL
NVVLKVESFVPKLDEMIDEAVAGVETLVIKPGESSAGKTSAGSDDWF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgatacgattatggtgcgttttggagaatacacgactaaagggcgaaatcgc
ggtttctttgagaagcggatttacgatcaggtgcgaagagtgctccgtcccttcgcagcc
gttcaaatgacacgcacatacggacgtatttatattaagcttaacggagagtcctacgag
cttatatcggctaagctcaagcatattttcgggattgcgtcattcagtccggccagcaag
tgcgaatcggagctggaggtgatccgcgagacggcgctcgaagtaatgcattcgctgccc
aagaagccgtcgaccttcaaagtgacgatgcgccgtgtcgacaagtcattcccgcatgat
tcgcaggagatgaatcatttggtaggcagtcatgtgctgcgtgcgatgccggatttaaag
gtggatgtcaagaatcccgaagtggagctccgagtcgagatacagccagagggaacctat
gtattctgcgaagtggtaccggctgccggcggatatccttacggcacgaacgggaaagcc
gttctgctgctgtcaggcggaatcgatagtccggttgccggatatttggcgatgcgcaaa
ggtctggagctggaggcgatccattatcacagcttcccgttcacgagcgagaaggcgaag
cagaaggtcattacgcttgcgcagaagctggctgatatgagcggcgttccattcaagctc
catatggtttcatttaccgaaattcaaaccgcgtttacccagtgcaatcaggatcacttg
atcattacacttatgagaagggcgatgctgcggatcgccgagcggctggccgagcaagcc
ggagcgctcgggatagttaccggcgacagcttgggccaagtggccagccaaacactgggc
agcatgaatgtcatcggaagaacggtagagctgccgctgctgcgtccgttgattacgacg
gacaagaatgagattatccggatcgcggagcagatcaaaacttatgcaacctccattctg
ccttatgaggactgctgtacgctgttcgtgccgaaatcgcccagcacgaacccgaatttg
aacgtcgtgctcaaggttgaatcattcgttccaaaactggatgagatgattgatgaagcg
gtagccggagtggagaccctcgtgatcaagccgggtgaatcttcggcgggaaagacaagc
gcgggcagcgacgactggttctag
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