Pseudoalteromonas spongiae: PSPO_a0012
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Entry
PSPO_a0012 CDS
T05098
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pspo
Pseudoalteromonas spongiae
Pathway
pspo00071
Fatty acid degradation
pspo00280
Valine, leucine and isoleucine degradation
pspo00310
Lysine degradation
pspo00362
Benzoate degradation
pspo00380
Tryptophan metabolism
pspo00410
beta-Alanine metabolism
pspo00640
Propanoate metabolism
pspo00650
Butanoate metabolism
pspo00907
Pinene, camphor and geraniol degradation
pspo00930
Caprolactam degradation
pspo01100
Metabolic pathways
pspo01110
Biosynthesis of secondary metabolites
pspo01120
Microbial metabolism in diverse environments
pspo01200
Carbon metabolism
pspo01212
Fatty acid metabolism
Module
pspo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pspo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSPO_a0012 (fadB)
00650 Butanoate metabolism
PSPO_a0012 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSPO_a0012 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSPO_a0012 (fadB)
00310 Lysine degradation
PSPO_a0012 (fadB)
00380 Tryptophan metabolism
PSPO_a0012 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSPO_a0012 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSPO_a0012 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSPO_a0012 (fadB)
00930 Caprolactam degradation
PSPO_a0012 (fadB)
Enzymes [BR:
pspo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSPO_a0012 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSPO_a0012 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSPO_a0012 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSPO_a0012 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF4921
Motif
Other DBs
NCBI-ProteinID:
ATC97283
UniProt:
A0A290SXQ7
LinkDB
All DBs
Position
I:complement(11583..13745)
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AA seq
720 aa
AA seq
DB search
MLFQSESFQVAFVKDNIAEFKFCVPGSVNKLSQQTLSDCGAALKELAANKDIKGMIFTSD
KDHFIVGADIFEFLPTFKKSEEELTQWIKNATDVFDLLEDLPFPTISAINGMALGGGCEW
VLATDFRVASEELKMGLPEVKLGIMPGFGGTVRLPRIIGADNAMTWITTGKEHRAKQALA
VGAVDAVVAKDKLVDSAIKMVELAANGKLDWQAKRQAKLDPLAMNQMEQGMSFATAQGMV
FGKTKGHYPSPLMAVATIKAAANLGRSEAMAIENMNFAKLAKTDEAAAQVGIFLADQFIK
SKARKLAKNSSTDIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDINQAALDLGMQEASKL
LGNKVQRGHMKLEKMVATLGAIKPTLSDDDVKKADIIVEAVVENPKVKQAVLSQLEKDMP
EGTVLTSNTSTIRIDELASALEKPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFNQLVVEGADFAKADKVMENVFGWPMGPAY
LLDVVGLDTANHCTGVMADGFPERMAEQEKDPVALLVKEGRFGQKNGKGFYQYAPDRKGK
PKKAKDADAIELLSAICDAPKEFSKEEVIDRCMIPMLNEVLLCLQENIVASPQEADMALI
YGLGFPPFRGGAFRYLDQIGLANFVAKADQYAHLGAIYQVSDITRQWAEEGRQFYSVEGA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctatttcaaagcgaatcttttcaggttgcttttgttaaagacaacattgctgagttt
aagttctgtgttccaggctcagtaaataagctttctcagcaaactcttagcgactgtggc
gctgcattaaaagagctagctgctaacaaagacattaaaggtatgattttcaccagtgat
aaagatcactttattgttggtgctgacatttttgaatttttacctacctttaaaaaatct
gaagaagaactaactcagtggattaaaaatgccactgacgttttcgacctactcgaagat
ttacctttcccaacgatttcagcaatcaatggcatggcccttggtggtggttgtgaatgg
gtacttgctactgacttccgtgtcgcaagtgaagaattaaaaatgggcttacctgaagtt
aaactaggcattatgccgggctttggtggtacagttcgtctaccacgtattatcggtgca
gataatgccatgacgtggattacaacaggtaaagaacaccgtgctaagcaagcgcttgct
gtgggtgctgttgatgctgttgtagcaaaagacaagctagttgattcagcaattaaaatg
gttgaactagctgcaaacggtaaacttgattggcaagcaaaacgccaagcgaagttagac
ccgttagcaatgaaccaaatggagcaaggcatgagctttgcaacagcgcaaggcatggta
tttggtaaaacaaaaggccattacccttctccgctgatggctgttgcaacaattaaagct
gctgcaaaccttggccgctctgaagcaatggcaattgagaatatgaactttgcgaagctg
gctaaaaccgatgaagcagctgcgcaagtgggtattttcctagcagaccaatttattaag
tctaaagcacgcaaacttgctaaaaacagttcaactgatatcaagcaagctgcagtattg
ggtgcaggtattatgggtggcggtattgcataccagtctgcttataaaggtacgccaatc
attatgaaagacatcaaccaagctgcccttgatcttggtatgcaagaagcatcaaaactg
cttggcaataaagttcaacgcggtcatatgaagcttgagaaaatggttgcaactttaggc
gcaatcaaaccaacgctaagcgatgacgatgttaaaaaagcagacattattgttgaagct
gtagttgaaaatccaaaggttaaacaagcggttctttctcaactagaaaaagacatgcct
gaaggcacagtactaacatcaaatacttcaacaattcgtattgatgaattagcaagtgca
cttgaaaagccagaaaatttctgtggtatgcacttctttaaccctgttcaccgtatgcca
ctggttgaaattattcgcggtgaaaaaacatctgacgaaaccatcaatgccgttgttgat
tacgcattaaaactaggaaagtcaccgattgttgtaaatgactgccctggtttctttgtg
aaccgtgtgcttttcccttactttgcaggctttaaccaattagtggttgaaggtgctgat
tttgctaaagcagataaagtgatggaaaacgtatttggctggcctatgggccctgcttac
ctgcttgatgttgttggtcttgatacagcaaatcactgtacaggtgtaatggcagacggt
ttccctgagcgtatggctgaacaagagaaagatcctgttgcactgcttgttaaagaaggt
cgttttggtcagaagaacggtaaaggtttctaccaatacgcaccagaccgtaaaggtaag
ccaaagaaagcaaaagatgcggatgcaattgagctactaagcgctatttgcgatgcacca
aaagaatttagcaaagaagaagtcatcgaccgttgtatgatccctatgctgaacgaagtg
cttctgtgcttacaagaaaacattgttgcttcaccacaagaagctgatatggcacttatt
tacggcttaggcttccctccattcagaggtggtgctttccgttatttagaccaaattggt
ttagctaactttgtagcaaaagcggatcaatacgcacacttaggtgcaatttaccaagtt
tctgatatcacgcgtcagtgggcagaagaaggtcgtcaattttattcagtagagggtgca
taa
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