Pandoraea sputorum: NA29_14165
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Entry
NA29_14165 CDS
T03554
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspu03009
]
NA29_14165 (rimO)
Enzymes [BR:
pspu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NA29_14165 (rimO)
Ribosome biogenesis [BR:
pspu03009
]
Prokaryotic type
ribosomal protein modification factors
NA29_14165 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AJC16857
UniProt:
A0A239SHR3
LinkDB
All DBs
Position
2238157..2239524
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AA seq
455 aa
AA seq
DB search
MSRPSPAGTPKVGFVSLGCPKALVDSEQILTQLRAEGYDIAGTYDGADLVVVNTCGFIDD
AVQESLDAIGEALAENGKVIVTGCLGAKKDAAGQDIVSAVHPKVLAVTGPHAVGEVMSAV
HTHLPKPHDPFTDLVPPAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPVAEV
MLEAENLFKAGVKELLVISQDTSAYGVDVKYRTGFWAGRPLKTRMTELVTALGELAKQYG
AWVRLHYVYPYPHVDEIIPLMAQGHILPYLDVPLQHAHPDVLKRMKRPASGEKNLERIQA
WRKMCPDLTIRSTFIAGFPGETEAEFEYMLDFLREAELDRVGCFAYSPVEGARANELPGA
LPDEVREERRARFMEVAEEISAERQQRKIGKTIQVIVDEINQDGGIARSAADAPEIDGLV
YIEPTAKAAKRLKVGEFVNVEVTGADGHDLWGEVV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccatcgcccgccggcacccccaaggtcggcttcgtttcgctcggctgcccc
aaggctttggtcgactccgagcagatcctgacccaactgcgcgccgaaggctacgacatt
gccggcacttatgacggcgccgacctcgtcgtggtcaacacctgtggcttcatcgacgac
gccgtgcaggaaagtctcgacgccatcggcgaagcactggccgagaacgggaaggtgatc
gtcaccggctgtctgggcgcgaagaaggacgctgccggtcaggacatcgtgagcgccgtg
cacccgaaggtgctcgccgttactggcccgcacgccgtgggcgaagtgatgagcgcggtg
cacacgcacctgcccaagccgcacgatccgttcaccgatctcgtcccgccggctggcatc
aagctcacgccgcgtcactatgcgtatctgaagatttccgaaggctgcaaccatcgctgc
acgttctgcatcatcccctcgatgcgtggcgatctcgattcgcgtccggtcgcggaagtg
atgctcgaagcggagaatctgttcaaggcaggtgtcaaggaactgctggtgatctcgcaa
gacaccagcgcgtacggcgtcgacgtgaagtaccgcaccggcttctgggcagggcgtccg
ctcaagacgcgcatgaccgaactggtgacggcactgggcgagcttgccaagcaatatggt
gcttgggtgcgtctgcactatgtctacccatatccgcatgtcgacgagatcattccgctg
atggcgcaaggccacatccttccgtatctcgacgtgccgctgcaacacgcgcatccggac
gtgctcaagcgcatgaagcgtccggcctcgggcgagaagaatctcgaacgcattcaggcc
tggcgcaagatgtgcccggatctgacgatccgcagcacgttcatcgccgggttcccgggc
gagaccgaagccgaattcgaatacatgctggacttcctgcgcgaagccgaactcgaccgc
gtgggctgcttcgcctattcgccggtcgaaggcgctcgcgccaacgagctgcctggcgcg
ttgcccgacgaagtacgtgaagagcgccgcgcgcgcttcatggaagtggccgaggagatt
tcggccgagcgtcagcagcgcaagatcggcaagaccattcaggtgatcgtcgacgaaatc
aatcaggacggcggcatcgcccgctcggctgccgacgcgcctgaaatcgacggcctcgtg
tacatcgagccgacggccaaggccgcgaagcgcctcaaggtcggtgagttcgtcaacgtc
gaagtcaccggtgccgacggccacgatctgtggggcgaggtcgtctga
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