KEGG   Punctularia strigosozonata: PUNSTDRAFT_49325
Entry
PUNSTDRAFT_49325  CDS       T03131                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
psq  Punctularia strigosozonata
Pathway
psq03020  RNA polymerase
psq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PUNSTDRAFT_49325
  09124 Replication and repair
   03420 Nucleotide excision repair
    PUNSTDRAFT_49325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psq03021]
    PUNSTDRAFT_49325
   03400 DNA repair and recombination proteins [BR:psq03400]
    PUNSTDRAFT_49325
Transcription machinery [BR:psq03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PUNSTDRAFT_49325
DNA repair and recombination proteins [BR:psq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PUNSTDRAFT_49325
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Elf1 Zn_Tnp_IS1 Cytochrome_C7 GpA_ATPase Cytochrom_c3_2 CGGC zf-C2H2 Ribosomal_S27e
Other DBs
NCBI-GeneID: 18883118
NCBI-ProteinID: XP_007379501
JGI: 49325
LinkDB
Position
Unknown
AA seq 128 aa
MASLHFCSECNNLLYPKADPQRRVMVSACRVCAYEEIGDNQCVYRNDLLTVTKEKIGVTT
DLGTDPTLAHAQIECPDCHHEDAVYFQDQSKRKETRMILFYVCTNCGKNFMDPSVPVGSR
AEDLTLNE
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcgtctctgcatttctgttcggaatgcaacaacttgctgtacccgaaggcggacccg
caacggcgcgtgatggtctcggcgtgccgcgtttgcgcatatgaggagattggagataat
cagtgtgtatataggaacgacttgcttaccgtcaccaaagaaaagattggtgtcacgact
gatttaggcacggacccgaccttggctcacgctcagattgaatgcccggattgccaccac
gaggacgcggtgtacttccaggaccagtcgaagcgcaaggagactcgcatgattctcttc
tatgtctgtacaaattgcggaaagaactttatggacccttcggtacccgtcggtagcaga
gcggaagacctgacattgaacgaataa

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