Pelodiscus sinensis (Chinese soft-shelled turtle): 102447256
Help
Entry
102447256 CDS
T02980
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03030
DNA replication
pss03410
Base excision repair
pss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102447256 (POLE)
03410 Base excision repair
102447256 (POLE)
03420 Nucleotide excision repair
102447256 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pss03032
]
102447256 (POLE)
03400 DNA repair and recombination proteins [BR:
pss03400
]
102447256 (POLE)
Enzymes [BR:
pss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102447256 (POLE)
DNA replication proteins [BR:
pss03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102447256 (POLE)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102447256 (POLE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
102447256
NCBI-ProteinID:
XP_075753979
Ensembl:
ENSPSIG00000015696
LinkDB
All DBs
Position
15:4772195..4829097
Genome browser
AA seq
2275 aa
AA seq
DB search
MVLRNSGRRRGEPGGGDPDTPRDDGSSLSALKRLERSQRTDRLDAQFGFERLKEPGEKTG
WLINMHPTETLDDDKRLVSCVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFLS
KKYQGKIAKLETVPKEDLDLPNHLVGLKRSYIQLSFNTVDDLVKVRREISPAVKKNRERD
QASDTYTTMLSSALIGGSLTMDEEGPSKKTINQMDNIVDMREYDVPYHIRLSIDLKIHVA
HWYNVRYRGSAYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMVD
GQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEARLIQRWFEHVQETKPTIMVT
YNGDFFDWPFVETRAAAHGLNMYNEIGFQKDNQGEYKASQCIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTDDGHVLDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTLRHAIEEEEGLPLDQVTNLQEVCD
EIKAKLSSLKDIPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
NCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKLPPLYPNGPPRAFHELSREEQAKFEKK
RLADYCRKAYKKLHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLAA
AVESGDASEAKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILV
KEGFTNDQYQELADPATLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIIS
KKPDGAPVTERAIPLAIFQAELSVRKHYLRKWLKSPSLQDFNIRTILDWDYYIERLGNTI
QKIITIPAALQQVKNPVPRIRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVTANQPQ
EGPSCSQVADMEDFGAPKPLQPAVPISSKRKRVPVAGESQELSESLELTQSWREILGPPP
PTGTTKEERQAWLRYHKKKWELQARQRQARRKKRRLADGQAAPGGGAVRDGPATGLGSYL
RRTARSILDLPWQIVQVAETSQPGLFRLWAVIGSDLHSLKLSIPRVFYVNQRVAKPEEGA
VYRKVNRVLPRSNLLYHLYEYSVPEDLYQEHLNEINASLAAPDIEGVYETQVPLLLRAVI
HLGCVCMVSRQLVRHLTGREADTFALEHLEMRSLAQFSYLEPGSIRHIYLYHHAQGSKAL
FGLFVPAQRKASVFVLDTVRSNQMPNLANLYTAERGNMAEKTGEELLPPDKHSFEVRAET
DPKTVSRAIQRLLLAYKDERRGPTLIAVQSNWAVKQLASGIPVLEEFPMVPMRVTDDISY
AVLDWQRHAARRMIRHYLSLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDVFFARHLRR
HNHLLWLSPAARPDLGGKEADDNRLVMEFDDRASVEINNPGCYSTVCVELDLQSLAVNTI
LQSHHINDMEGAASTSVSFDVLPQASLEDMVTGNQAAGLPASYDETALCSNAFRILKSMV
VGWVKEITQYHNVYADHQVIHFYRWLRSPASLLHDPALHRTLHTMMRKLFLQLVAEFKRL
GSTVVYANFNRLVLCTKKRRIEDALAYVEYVTNSIHSKEIFHSLTISFSRCWEFLLWMDP
TNYGGIKGRVPSSAPSAEAEANRRQEESKEEEEKDQEETSVEDLLENNWNVVQYLPQAAS
CQNYFLMIVSAYVVAVYHSMKEELRRNAPGATPVRRRAGSQASQEPAGEAGALPGVITFS
QDYVANELTQSFFTIIQKIQKKVTGSRHATLPSDMFPVLPGSYLPLNNPALEFVKYVCKV
LSLDANITNQVNKLKRDLLRLVDVGEFSEEAQFRDPCRSYVLSEVICRNCNFCRDLDLCK
EPGVSQDSAVPPGWVCSNCQAEYDRDGIEMALVEALQKKLMAFTLQDLVCPKCKGVKEAH
MPIYCSCAGDFTPMISTQAFVDQIHVFRSIAQHFGMAHLLETVEWLLQMNPQLRR
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaggaacagcgggaggcggcgcggcgagcccgggggcggggaccccgacacc
ccgcgggacgatggctcctcgctctccgccctcaagcgcctggagcgcagccagcgcacc
gaccggctggacgcccagttcggcttcgagcgcctcaaggagccgggggagaagaccggc
tggctgatcaacatgcaccctaccgagacgctggacgacgacaaacgcttggtcagctgt
gtcgactactacttcatccaggacgacgggagccggtttaaggtggcgctgccctacaaa
ccatacttctacatcgcaacccggaagggctgcgagcgagaagtctcctccttcctctcc
aagaagtaccaaggaaaaattgcgaagctggaaacggttcccaaagaagatctcgacttg
cccaatcacctggtgggcctcaagcggagctacatccaactgtccttcaacacggtggat
gacctggtgaaggtgcggagggagatctcgcccgctgtgaagaagaaccgggaacgagac
caggcgagcgacacctacacgaccatgctgtccagcgctctgatcggtggcagcctgacc
atggatgaagaggggccctcgaagaagaccatcaaccagatggacaacatagtggacatg
cgggagtacgatgtgccctaccacatccgtctgtccatcgacctgaagatccacgtggcg
cattggtacaacgtccgctaccggggcagcgcgtaccctccggagatcacccgccgggat
gacctggtggagcgcccggacccggtggtgctggccttcgacatcgaaaccaccaagctg
cccctgaagttccccgacgcggagacggaccagatcatgatgatctcctacatggttgat
ggccagggctacctgatcacaaaccgggagatcgtctcggaggacattgaagattttgag
tttacgcccaagccggagtacgaggggcccttttgcgtctttaacgagcccgacgaggcc
cgcttaatccagaggtggtttgagcacgtccaagagaccaaacccaccatcatggtcacg
tacaacggggacttctttgactggccgtttgtggagacccgagccgccgcgcacgggctg
aatatgtacaacgagattgggttccagaaggacaaccaaggggagtacaaagcctcgcag
tgcatccacatggactgtctgaggtgggtgaagagagacagctacctgccggtgggaagc
cacaacctcaaagcggcagccaaagccaagctgggctacgacccggtggagctggacccc
gaggagatgtgccggatggcgacggaagagccgcagaccctggccacgtactcggtgtcg
gacgctgtcgcgacctactacatgtacatgaagtacgtgcaccctttcatcttcgccctg
tgcaccatcatccccatggagcccgacgaggtgctccggaaaggctccgggacgttgtgc
gaggcgctgctcatggtgcaagcctaccacgccaacatcatcttccccaacaagcaggag
caggagttcaacaagctcacggacgacgggcacgtgctggactcggagacctacgtgggc
ggccacgtggaggcgctggagtcgggggttttccgcagcgacatcccctgccgctttaaa
atgaatcccgctgccttcgacttcctgctgcagcgtgtggagaagacgcttcggcacgct
atcgaggaggaggagggcttgccgttggatcaggtcaccaacctccaggaggtgtgtgat
gaaatcaaggccaagctgagctccttgaaggacatcccaaaccggattgagtgtcccctc
atctaccatcttgacgtgggggccatgtaccccaatatcatcctgacaaacaggctgcag
ccttcggcgatggtggacgaggccacgtgtgctgcctgcgattttaacaagccgggtgcc
aattgccagcgccggatgacctggcagtggcgaggggaattcatgcccgccagccgtagc
gagtaccaccgcatccagcaacagctggagtcggagaagctgccgccgctctacccgaac
ggcccgccccgggcctttcacgagctgtcccgcgaagagcaggccaagtttgagaagaag
cgcctagcagattactgccgcaaggcttataagaagctgcacgtcaccaaggtggaagaa
cgtgtcaccaccatctgccaacgggagaactccttctacgtggacacggtgcgggccttc
cgggaccggcgctacgaatttaaagggctgcacaaggtatggaagaagaagctcgccgcg
gccgttgagtcgggagatgcctcggaagcgaagcgctgcaagaacatggagatcctctac
gactccttgcagctggcgcacaagtgcatcctcaactccttctacggctacgtcatgcgc
aaaggggcccgttggtattccatggagatggccggcatcgtttgcttcactggcgctaac
atcatcacgcaagccagggagctaattgagcagattgggagaccgctggagctggacacg
gacggaatctggtgcgtcctccccaacagcttcccagaaaacttcgtcatcaagtcgacc
aacgccaagaagcccaaggtgaccatctcctatcccggcgccatgctgaacatcctggtg
aaggaaggcttcacgaacgatcagtaccaggagctggccgacccggcgacgctcacctac
gtgacccgctccgagaacagcattttctttgaagtggatggaccctacttggccatgatc
cttcccgcctccaaggaggagggcaagaagctgaagaaacggtacgccgtgttcaacgag
gacgggtccctggcagagctgaaaggcttcgaggtgaagcggcgcggggagctgcagctg
gtgaagatcttccagtcgtccgtgttcgaggccttcctcaagggcaccacgctggaggag
gtctacgcctcggtggccaaggtggccgactattggctggacgtgctgtacagcaaggct
gccaacatgccggactcggagctgtttgagctgatttccgagaaccgctccatgtcccgc
aagctggaggactacggggagcagaaatccacctccatcagcacggccaagcgcttggcc
gagttcctcggggaccagatggtgaaggacgccgggctgagctgtcgcttcatcatctcc
aagaaaccagacggggcgccggtcaccgagagggccatcccgctggccatcttccaagct
gagctgagcgtgcggaagcactacctccgcaaatggctgaagagcccctccctgcaggac
ttcaacatccgcacgatcctggactgggactactacatcgagcgactgggcaacaccatt
cagaaaatcatcaccatccccgccgcgctgcagcaggtgaagaaccccgtgccccgcatc
cggcaccccgactggctgcacaagaagctcctggagaagaacgacgtctacaagcagaag
aaaatcaacgagctgttcactagcgagggcaagagacaggtcactgccaaccagccccag
gagggcccctcctgctcccaggtggccgacatggaggattttggggcgcccaagcccctg
cagccggccgtccctatctccagcaaacgcaagagggtcccggtggccggggagagccag
gagctgtccgagagcctggagctgacccagtcgtggcgggagatcttgggcccgcccccg
cctaccggcaccaccaaggaggagcgccaggcctggctccgctaccacaagaagaagtgg
gagctgcaggcccggcagcggcaggcgcgccggaagaagcggcggctggcggacggccag
gcggcgccgggcggcggcgcggtccgggacgggcccgccacggggctgggcagctacctg
cgccggacggcccgcagcatcctggacctgccgtggcagatcgtgcaggtggcggagacc
agccagccgggcctgttccggctgtgggccgtcatcgggagcgacctgcattccctcaag
ctgagcatcccccgcgtcttctacgtcaaccagcgggtggccaagccggaggagggagcg
gtctatcgcaaggtcaacagggtcctgccccgttccaacttgctctaccatctctacgag
tactccgtccccgaggacctctaccaggagcacctcaacgagatcaacgccagcctggcc
gccccggacatcgagggggtgtacgagactcaggtgccgttacttctccgggccgtgatc
cacctgggctgcgtgtgcatggtgagccggcagctggtccggcatctcacaggccgggag
gcggacaccttcgccctggagcacctggagatgcgttcactggcccagttcagctacctg
gagccagggagcatccgtcacatctacctctaccaccacgcccaaggcagcaaggcgctt
tttggcctcttcgtccccgcccagcgcaaggcctccgtcttcgtgctggacacggtacgc
agtaaccaaatgcccaacctcgccaacctgtacacggcggagcgcggcaacatggcggag
aaaacgggcgaggagctactcccgccggataagcattccttcgaggtgcgggccgagacc
gaccccaagacggtctcccgggccatccagcgcctgctgctggcctacaaggacgagcgc
cgaggccccacgctgatcgccgtgcagtccaactgggccgtgaagcagctggcgagcggg
attcccgtcttggaagagttccccatggtgcccatgcgggtgacggacgacatcagctac
gccgtcctggattggcagcgccacgccgcccgccgcatgattcgccactacctcagcctg
gacacctgcctgtcgcaggccttcgagatgagcagatactaccacatccccatcgggaac
ctccccgacgacatctccaccttcgggtccgacgtcttcttcgcccgccacctgcggcgg
cacaaccacctgctgtggctgtcgcccgcggcccgcccggacctggggggcaaggaggcc
gacgacaaccggctggtgatggagttcgacgaccgagcctcggtggagatcaacaacccg
ggctgctactccaccgtgtgtgtggagctggacctccagagcctagccgtgaacaccatc
ctgcagtcccaccacatcaacgacatggagggcgcagccagcaccagcgtcagcttcgac
gtcctcccgcaggcctccctcgaggacatggtgacgggcaaccaggcggccggcctcccg
gccagctacgacgagaccgccctgtgctccaacgccttcaggatcctgaagagcatggtg
gtgggctgggtgaaggagatcacacagtaccacaacgtctacgccgaccaccaggtgatc
cacttctaccgctggctccgctccccggcctccctgctgcacgacccggccctgcaccgc
accctccacaccatgatgaggaagctcttcctgcagctggtggccgagttcaagcgcctc
ggctccacggtagtctacgccaacttcaaccgtctcgtcctgtgcaccaagaagcggcgc
atcgaggacgccctggcctacgtggagtacgtcaccaacagcattcactccaaggagatc
ttccactccctgaccatctccttctcccgttgctgggagttcctgctgtggatggaccca
acgaactatgggggcatcaagggcagggtgccctccagtgccccctcagcggaggcggag
gccaacagaaggcaagaagagtccaaggaggaggaggagaaagatcaagaggagaccagc
gtggaggacttgctggagaacaactggaacgtggtgcagtacctcccccaggcggcctcc
tgccagaactacttcctcatgatcgtgtcggcctacgtcgtcgccgtgtaccacagcatg
aaggaggagctccggcgcaatgcccccggcgccaccccggtccggagacgggccggcagc
caggcctcccaggagcccgcgggtgaagcgggcgccctgcccggcgtgatcactttctct
caggactacgttgccaacgagctcacccagagcttcttcaccatcatccagaagatccag
aagaaggtgaccggctcccgccacgccacgctgccctcggacatgttcccggtcctgccc
ggctcctacctgccgctcaacaacccggcgctggaattcgtcaaatacgtctgcaaggtg
ctgtccttggacgccaacatcaccaaccaggtgaacaaactcaaacgagacctgctccgc
ctggtggacgtgggcgagttctcggaggaggcccagttccgcgacccctgccgctcctac
gtcctctccgaagtcatctgccgcaactgcaacttctgcagggacctggacctatgcaaa
gaaccaggcgtgtctcaggatagcgctgtgccgcccggctgggtgtgctccaattgccag
gcagagtatgaccgcgacggcatcgaaatggctctggtggaggccctgcagaagaagctg
atggccttcacgctccaggacttggtgtgccccaagtgcaaaggcgtgaaggaggctcac
atgcccatctactgcagctgcgccggggatttcaccccgatgatctccacccaggccttc
gtggaccagatccacgtcttccgcagcatcgcccagcacttcggcatggcccacctgctg
gagaccgtcgagtggctgctgcagatgaacccccagctccggcgatga
DBGET
integrated database retrieval system
