Pelodiscus sinensis (Chinese soft-shelled turtle): 102447256
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Entry
102447256 CDS
T02980
Symbol
POLE
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03030
DNA replication
pss03410
Base excision repair
pss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102447256 (POLE)
03410 Base excision repair
102447256 (POLE)
03420 Nucleotide excision repair
102447256 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pss03032
]
102447256 (POLE)
03400 DNA repair and recombination proteins [BR:
pss03400
]
102447256 (POLE)
Enzymes [BR:
pss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102447256 (POLE)
DNA replication proteins [BR:
pss03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102447256 (POLE)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102447256 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
102447256
NCBI-ProteinID:
XP_025040038
Ensembl:
ENSPSIG00000015696
LinkDB
All DBs
Position
Unknown
AA seq
2007 aa
AA seq
DB search
MLIFGHVRTSQPGGGKNVSLKKSDMPVSWQGCEREVSSFLSKKYQGKIAKLETVPKEDLD
LPNHLVGLKRSYIQLSFNTVDDLVKVRREISPAVKKNRERDQAIDACPATVVFSPAPFSA
LIGGSLTMDEEGPSKKTINQMDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSAYP
PEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMVDGQGYLITNREIVS
EDIEDFEFTPKPEYEGPFCVFNEPDEARLIQRWFEHVQETKPTIMVTYNGDFFDWPFVET
RAAAHGLNMYNEIGFQKDNQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGY
DPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLR
KGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGHVEALESGVFRS
DIPCRFKMNPAAFDFLLQRVEKTLRHAIEEEEGLPLDQVTNLQEVCDEIKAKLSSLKDIP
NRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGE
FSECRRARYHRIQQQLESEKLPPLYPNGPPRAFHELSREEQAKFEKKRLADYCRKAYKKL
HVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLAAAVESGDASEAKRC
KNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIG
RPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELA
DPATLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVK
RRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELIS
ENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPDGAPVTERAI
PLAIFQAELSVRKHYLRKWLKSPSLQDFNIRTILDWDYYIERLGNTIQKIITIPAALQQV
KNPVPRIRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQDPGSCSRAELGAELRSTSSS
APPQVPLLLRAVIHLGCVCMVSRQLVRHLTGREADTFALEHLEMRSLAQFSYLEPGSIRH
IYLYHHAQGSKALFGLFVPAQRKASVFVLDTVRSNQMPNLANLYTAERGNMAEKTGEELL
PPDKHSFEVRAETDPKTVSRAIQRLLLAYKEERRGPTLIAVQSNWAVKQLASGIPVLEEF
PMVPMRVTDDISYAVLDWQRPAARRMIRHYLSLDTCLSQAFEMSRLGVRGWQGCAPVRGV
VAGCALQMGRVEVSRPSLLLPYLGKVLSLVSSSGHHIAGKISETRSNRLVMEFDDRASVE
INNPGCYSTVCVELDLQSLAVNTILQSHHINDMEGAASTSVSFDVLPQASLEDMVTGNQA
AGLPASYDETALCSNAFRILKSMVVGWVKEITQYHNVYADHQVIHFYRWLRSPASLLHDP
ALHRTLHTMMRKLFLQLVAEFKRLGSTVVYANFNRLVLCTKKRRIEDALAYVEYVTNXXX
XXXIFHSLTISFSRCWEFLLWMDPTNYGGIKGRVPSCAPSAEVRVRAGQRAGWRASGPGM
GPISSARDPLXAEANRRQEESEEEEEKDQEETSVEDLLENNWNVVQYLPQAASCQNYFLM
IVSGECAPGGLAWGGHEEPAGEPGALPGVITFSQDYVANELTQSFFTIIQKIQKKVTGSP
HATLPSDMFPVLPSSYLPLNNPALEFVKYVCKVLSLDANITNQVNKLKRDLLRLVDVGEF
SEEAQFRDPCRSYVLSEVICRNCNFCRDLDLCKEPGVSQDSAVPPGWVCSNCQAEYDRDG
IEMALVEALQKKLMAFTLQDLVCPKCKGVKEAHMPIYCSCAGDFTPMISTQAFVDQIHVF
RSIAQHFGMAHLLETVEWRAQRKEGNP
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttttggccacgtgcgtacgagccaaccgggggggggaaaaaatgtttcctta
aagaaaagtgacatgcccgtctcttggcagggctgcgagcgagaagtctcctccttcctc
tccaagaagtaccaaggaaaaattgcgaagctggaaacggttcccaaagaggatctcgac
ttgcccaatcacctggtgggcctcaagcggagctacatccaactgtccttcaacacggtg
gatgacctggtgaaggtgcggagggagatctcgcccgctgtgaagaagaaccgggaacga
gaccaggcgatagacgcctgtcctgcgaccgtggttttttcccctgctcctttcagcgct
ctgatcggtggcagcctgaccatggatgaagaggggccctcgaagaagaccatcaaccag
atggacaacatagtggacatgcgggagtacgatgtgccctaccacatccgtctgtccatc
gacctgaagatccacgtggcgcattggtacaacgtccgctaccggggcagcgcgtaccct
ccggagatcacccgccgggatgacctggtggagcgcccggacccggtggtgctggccttc
gacatcgaaaccaccaagctgcccctgaagttccccgacgcggagacggaccagatcatg
atgatctcctacatggttgatggccagggctacctgatcacaaaccgggagatcgtctcg
gaagacattgaagattttgagtttacgcccaagccggagtacgaggggcccttttgcgtc
tttaacgagcccgacgaggcccgcttaatccagaggtggtttgagcacgtccaagagacc
aaacccaccatcatggtcacgtacaacggggacttctttgactggccgtttgtggagacc
cgagccgccgcgcacgggctgaatatgtacaacgagattgggttccagaaggacaaccaa
ggggagtacaaagcctcgcagtgcatccacatggactgtctgaggtgggtgaagagagac
agctacctgccggtgggaagccacaacctcaaagcggcagccaaagccaagctgggctac
gacccggtggagctggaccccgaggagatgtgccggatggcgacggaagagccgcagacc
ctggccacgtactcggtgtcggacgctgtcgcgacctactacatgtacatgaagtacgtg
caccctttcatcttcgccctgtgcaccatcatccccatggagcccgacgaggtgctccgg
aaaggctccgggacgttgtgcgaggcgctgctcatggtgcaagcctaccacgccaacatc
atcttccccaacaagcaggagcaggagttcaacaagctcacggacgatgggcacgtgctg
gactcggagacctacgtggggggccacgtggaggcgctggagtcgggggttttccgcagc
gacatcccctgccgctttaaaatgaatcccgctgccttcgacttcctgctgcagcgtgtg
gagaagactcttcggcacgctatcgaggaggaggagggcttgccgttggatcaggtcacc
aacctccaggaggtgtgtgatgaaatcaaggccaagctgagctccttgaaggacatccca
aaccggattgagtgtcccctcatctaccatcttgacgtgggggccatgtaccccaatatc
atcctgacaaacaggctgcagccttcggcgatggtggacgaggccacgtgtgctgcctgc
gattttaacaagccgggcgccaattgccagcgccggatgacctggcagtggcgaggggaa
ttcagtgagtgtcgccgcgcccggtaccaccgcatccagcaacagctggagtcggagaag
ctgccgccgctctacccgaacggcccgccccgggcctttcacgagctgtcccgcgaagag
caggccaagtttgagaagaagcgcctagcagattactgccgcaaggcttataagaagctg
cacgtcaccaaggtggaagaacgcgtcaccaccatctgccaacgggagaactccttctac
gtggacacggtgcgggccttccgggaccggcgctacgaatttaaagggctgcacaaggta
tggaagaagaagctcgccgcggccgttgagtcgggagatgcctcggaagcgaagcgctgc
aagaacatggagatcctctacgactccttgcagctggcgcacaagtgcatcctcaactcc
ttctacggctacgtcatgcgcaaaggggcccgttggtattccatggagatggccggcatc
gtttgcttcactggcgctaacatcatcacgcaagccagggagctaattgagcagattggg
agaccgctggagctggacacggatggaatctggtgcgtcctccccaacagcttcccagaa
aacttcgtcatcaagtcgaccaacgccaagaagcccaaggtgaccatctcctatcccggc
gccatgctgaacatcctggtgaaggaaggcttcacgaacgatcagtaccaggagctggcc
gacccggcgacgctcacctacgtgacccgctccgagaacagcatcttctttgaagtggat
gggccctacttggccatgatccttcccgcctccaaggaggagggcaagaagctgaagaaa
cggtacgccgtgttcaacgaggacgggtccctggcggagctgaaaggcttcgaggtgaag
cggcgcggggagctgcagctggtgaagatcttccagtcgtccgtgttcgaggccttcctc
aagggcaccacgctggaggaggtctacgcctcggtggccaaggtggccgactattggctg
gacgtgctgtacagcaaggctgccaacatgccggactcggagctgtttgagctgatttcc
gagaaccgctccatgtcccgcaagctggaggactacggggagcagaaatccacctccatc
agcacggccaagcgcttggccgagttcctcggggaccagatggtgaaggacgccgggctg
agctgtcgcttcatcatctccaagaaaccagacggggcgccggtcaccgagagggccatc
ccgctggccatcttccaagctgagctgagcgtgcggaagcactacctccgcaaatggctg
aagagcccctccctgcaggacttcaacatccgcacgatcctggactgggactactacatc
gagcgactgggcaacaccattcagaaaatcatcaccatccccgccgcgctgcagcaggtg
aagaaccccgtgccccgcatccggcaccccgactggctgcacaagaagctcctggagaag
aacgatgtctacaagcagaagaaaatcaacgagctgttcactagcgagggcaagagacag
gaccccggaagctgctcccgtgcagaattgggggcggagctccgctcgacgtcctcaagt
gctcctccccaggtgccgttacttctccgggccgtgatccacctgggctgcgtgtgcatg
gtgagccggcagctggtccggcatctcacaggccgggaggcggacaccttcgccctggag
cacctggagatgcgttcactggcccagttcagctacctggagccagggagcatccgtcac
atctacctctaccaccacgcccaaggcagcaaggcgctttttggcctcttcgtccccgcc
cagcgcaaggcctccgtcttcgtgctggacacggtacgcagtaaccaaatgcccaacctc
gccaacctgtacacggcggagcgcggcaacatggcggagaaaacgggcgaggagctactc
ccgccggataagcattccttcgaggtgcgggccgagaccgaccccaagacggtctcccgg
gccatccagcgcctgctgctggcctacaaggaggagcgccgaggccccacgctgatcgcc
gtgcagtccaactgggccgtgaagcagctggcgagcgggattcccgtcttggaagagttc
cccatggtgcccatgcgggtgacggacgacatcagctacgccgtcctggattggcagcgc
cccgccgcccgccgcatgattcgccactacctcagcctggacacctgcctgtcgcaggcc
ttcgagatgagcaggttgggtgtccgggggtggcagggctgtgccccagtgcggggagtc
gtggctggctgcgcccttcagatggggcgggtggaggtcagccgcccgtccctcctgctc
ccctaccttggaaaagttttgagtcttgtgtccagttctgggcaccacattgcaggaaag
atttcagaaacgcgctccaaccggctggtgatggagttcgacgaccgagcctcggtggag
atcaacaacccgggctgctactccaccgtgtgtgtggagctggacctccagagcctagcc
gtgaacaccatcctgcagtcccaccacatcaacgacatggagggcgcagccagcaccagc
gtcagcttcgacgtcctcccgcaggcctccctcgaggacatggtgacgggcaaccaggcg
gccggcctcccggccagctacgacgagaccgccctgtgctccaacgccttcaggatcctg
aagagcatggtggtgggctgggtgaaggagatcacacagtaccacaacgtctacgccgac
caccaggtgatccacttctaccgctggctccgctccccggcctccctgctgcacgacccg
gccctgcaccgcaccctccacaccatgatgaggaagctcttcctgcagctggtggccgag
ttcaagcgcctcggctccacggtagtctacgccaacttcaaccgtcttgtcctgtgcacc
aagaagcggcgcatcgaggacgccctggcctacgtggagtacgtcaccaacnnnnnnnnn
nnnnnnnngatcttccactccctgaccatctccttctcccgttgctgggagttcctgctg
tggatggacccaacgaactatgggggcatcaagggcagggtgccctcctgtgccccctca
gcggaggtaagagtccgggcggggcagagggctgggtggagggccagcgggccaggcatg
gggccgatctcttctgcccgggaccctttgtaggcggaggccaacagaaggcaagaagag
tctgaggaggaggaggagaaagatcaagaggagaccagcgtggaggacttgctggagaac
aactggaacgtggtgcagtacctcccccaggcggcctcctgccagaactacttcctcatg
atcgtgtcgggtgagtgcgccccgggggggctcgcctggggtggacatgaggaaccggcg
ggtgagccgggcgccctgcccggcgtgatcactttctctcaggactacgtcgccaacgag
ctcacccagagcttcttcaccatcatccagaagatccagaagaaggtgaccggctccccc
cacgccacgctgccctcggacatgttcccggtcctgcccagctcctacctgccactcaac
aacccggcgctggaattcgtcaaatacgtctgcaaggtgctgtccttggacgccaacatc
accaaccaggtgaacaaactcaaacgagacctgctccgcctggtggacgtgggcgagttc
tcggaggaggcccagttccgcgacccctgccgctcctacgtcctctccgaagtcatctgc
cgcaactgcaacttctgcagggacctggacctatgcaaagaaccaggcgtgtctcaggac
agcgctgtgccgcccggctgggtgtgctccaattgccaggcagagtatgaccgcgacggc
atcgaaatggctctggtggaggccctgcagaagaagctgatggccttcacgctccaggac
ttggtgtgccccaagtgcaaaggcgtgaaggaggctcacatgcccatctattgcagctgc
gccggggacttcaccccgatgatctccacccaggccttcgtggaccagatccacgtcttc
cgcagcatcgcccagcacttcggcatggcccacctgctggagaccgtcgagtggcgggcg
cagagaaaggaaggcaatccgtga
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integrated database retrieval system
