KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102448474
Entry
102448474         CDS       T02980                                 
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03022  Basal transcription factors
pss03420  Nucleotide excision repair
pss04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102448474 (CDK7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102448474 (CDK7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102448474 (CDK7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pss01001]
    102448474 (CDK7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pss03021]
    102448474 (CDK7)
   03019 Messenger RNA biogenesis [BR:pss03019]
    102448474 (CDK7)
   03400 DNA repair and recombination proteins [BR:pss03400]
    102448474 (CDK7)
Enzymes [BR:pss01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     102448474 (CDK7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     102448474 (CDK7)
Protein kinases [BR:pss01001]
 Serine/threonine kinases: CMGC group
  CDK family
   102448474 (CDK7)
Transcription machinery [BR:pss03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     102448474 (CDK7)
Messenger RNA biogenesis [BR:pss03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     102448474 (CDK7)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     102448474 (CDK7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like Seadorna_VP7 ABC1 Haspin_kinase FTA2 APH Pkinase_fungal
Other DBs
NCBI-GeneID: 102448474
NCBI-ProteinID: XP_006119220
Ensembl: ENSPSIG00000010079
LinkDB
Position
Unknown
AA seq 342 aa
MDARMRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE
IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDSSLVLTPSHIKAYMLMTL
QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPE
LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKIFETLGTPTEEQWPGMSS
LPDYVTFKSFPGMPLQHIFSAAGDDLLDLLQGLFIFNPCTRVTATQALKQKYFSNRPGPT
PGSQLPRPNCPAEALKEQNSLLNLKRKRADGIEQGLPKKLIF
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggacgcgaggatgcgagcgaagcgctacgagaagctcgatttcttgggcgaggggcag
tttgccactgtttataaagcaagggataaaaacaccaatcaaattgttgctattaaaaag
attaaacttggacatagatcagaagcgaaagatggaatcaacagaacagctctgagggag
ataaaattgttacaggagcttagccatccaaatatcattgggcttcttgatgcatttgga
cacaaatccaatattagtttggtctttgattttatggaaacagatctagaggttataata
aaggatagtagtcttgtgctgacaccgtctcacatcaaagcatatatgctgatgactctt
caagggttggaatatttacatcagcactggattctacacagagatctcaaaccaaacaat
ttgttactagatgaaaatggggttctaaaactggctgactttggcttggcaaaatctttc
ggaagcccaaatagagtctatacacaccaggtagtaacaagatggtatcgagcgcctgag
ctattgtttggtgctagaatgtatggtgtaggtgttgatatgtgggctgttggctgtata
ttagcagaactgcttcttagggttccttttttgcctggagactctgatcttgatcagttg
acaaaaatatttgaaactctagggactccaacagaagaacagtggcctggcatgtctagt
cttccagattatgtaacatttaaaagtttccctggaatgccacttcagcatatcttcagt
gcagctggtgatgacttgctagatcttctccaaggtctattcatatttaatccttgtacc
agggttacagctacacaggcactgaaacaaaagtattttagtaatcgaccaggaccaaca
ccaggaagtcagttgccacgaccaaactgtcctgcagaagccttaaaagaacaaaactca
cttttaaatttaaaaaggaagagagcagatggaatagaacaaggattaccaaaaaagcta
attttttga

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