Pelodiscus sinensis (Chinese soft-shelled turtle): 102449049
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Entry
102449049 CDS
T02980
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102449049 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
DL-JAG_EGF-like
Di19_C
Motif
Other DBs
NCBI-GeneID:
102449049
NCBI-ProteinID:
XP_014427833
Ensembl:
ENSPSIG00000010572
LinkDB
All DBs
Position
Unknown
AA seq
2514 aa
AA seq
DB search
SLLPALSRGYDCPQSAEVCLNGGKCEAYSNGTLVCLCNSAHLGDRCQLPNPCLSSPCKNA
GTCHPVARGNAVDYTCSCRLGFTDRLCLTPEENACLNNPCRNGGTCDLLTLTEYKCRCPP
GWSGKTCQQADPCASNPCANGGQCVPFEAHYVCKCTKGFHGPNCKQDLNECNIIPPVCKN
GGSCTNEIGSYQCSCKPAYTGQNCEHLYMPCNPSPCQNGGTCRQTSDTTYDCTCLPGFAG
QNCEDNIDDCPGNNCKNGGTCVDGVNTYNCQCLPEWTGQYCTEDVDECQLMPNACQNGGT
CHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCECPHGRTGLLCH
LDDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACNQDIDECSLGANPCEHAGKCIN
TQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMPGYEGVYCEINT
DECASSPCLHNGNCIDKINEFYCECPTGFNGHLCQYDVDECASTPCKNGAKCLDGPNTYT
CECTEGFTGTHCEIDINECDPDPCHYGTCRDGIAAFTCLCQAGYTGHRCDININECQSQP
CKNGGTCQDRNNAYYCLCLKGTTGPNCEINLDDCASNPCDYGKCQDKINGYECACEPGYT
GRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGYHDPMCVLEVNECNSNPCIHGKCN
DGLNGYRCDCDPGWSGTNCDINNNECESNPCANGGTCKDMTSGYICTCREGFSGPNCQTN
INECASNPCLNQGTCIDDVAGYQCNCLLPYSGATCEDVLAPCAAGPCKNGGECRESEDYE
SFSCVCPSGWQGQTCEIDINECVKNPCRHGATCQNTNGSYWCNCKAGYTGRTCDTDIDDC
KPSKRWRASALRAGGQHPSCECASNPCKNGANCTDCVNSYTCTCPSGFSGIHCENNTPDC
TESSCFNGGTCVDGINTFTCVCPPGFTGSYCEHDINECDSKPCLNGGTCQDSYGTYKCTC
PQGYTGLNCQNLVRWCDSSPCKNGGKCWQTHNLYRCECNSGWTGLYCDVPSVSCDVAAKQ
QDVDVAHLCRNSGLCVDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGY
SCECVAGYHGVNCSEEINECLSHPCQNGGTCIDLINTYKCSCPRGTQGVHCEINIDDCSP
FFDPVTLGPKCFNNGKCTDRVGGYSCVCPPGFVGERCEGDVNECLSNPCDVRGTQNCVQR
VNDYKCECRQGYTGRRCDTVVDGCKGKPCRNGGTCAVASNTGRGFICKCPPGFVGATCEN
DSRTCGNLHCLNGGTCISIHKSSKCMCAPAFTGPDCQYPLSSPCTSNPCYNGGTCEFFSE
APPYYQCNCLANFNGLYCHILDFDFQGGVGQDIIPPTIEEKCEIPVCAGLAGNKICDGKC
NNHPCGWDGGDCSLNFNDPWKNCSHSLQCWKYFNDGKCDAQCNNSGCLYDGFDCQKVEGQ
CNPLYDQYCKDHFSDGHCDQGCNNAECEWDGLDCANNMPEKLADGTLVVVVLITPENLKN
NSFNFLRELSRILHTNVVFKKNPKGEYMIFPYYGNEEELKKHHIKRSTENWADVPSAVFN
TVKTSLSSRVSGRQRRELDQMDIRGSIVYLEIDNRQCIVSSSQCFQSATDVAAFLGALAS
LGNLNIPYKIEAVKSETAELPRNTQLYPMYVVVAVLALLAFICVGVVVSRKRRREHGQLW
FPEGFKVTESSKKKRREPLGEDSVGLKPLKNASDGTLMDDNQNEWGDEETLDTKKFRFEE
QAMLPDADDQTDHRQWTQQHLDAADLRISSMAPTPPQGEIDADCMDVNVRGPDGFTPLMI
ASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRL
LEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV
EGMLEDLINCHADVNAVDDLGKSALHWAAAVNNVEAAMVLLKNGANKDMQNNKEETPLFL
AAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPPLHNG
PLGAPTLSPPLCSPNGYIGNLKPAAQGKKARKLSAKGLSCPSKDSKDAKARRKKSQDGKG
GLLDSSSVLSPVDSLESPHGYLSDVASPPLMTPPFQQSPSVPLNHLPGLPDAHLGINHLN
MAGKQEMAMGGSSRMAFESMPPRLSHLPVSSPGTALSSAPMNFTVGGATSLNGQCDWLTR
LQNGMVQNQYNPMRSNVQPGAHQQSQALPHGMMTPLHNGMPTTALSQMMSFQPMPNTRLA
SQPHLMQAQQMQQIQQQQQNLQQQLQQQNMQQQQQQHHNPSSNANGHISQNFLGNELTQS
DMPQVSGSTMPVHTILPQETQILSTSLPSSLTQPMTTTQFLTPPSQHSYSSPLDNTPNHQ
LQVPDHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTSMQSQIGHIPEAFK
NT seq
7545 nt
NT seq
+upstream
nt +downstream
nt
tccctgctgcccgcgctcagccgaggttacgactgcccacagtctgccgaagtctgcttg
aatggaggaaagtgtgaagcttactccaatgggactctggtctgcctatgcaacagcgcc
cacctaggggaccggtgccagctgccaaacccttgtctcagctccccgtgcaagaatgcc
ggcacctgccacccggtcgcccgcggcaacgccgtggactacacctgttcctgccgcctg
ggtttcacagaccggctgtgcctgacgcccgaggagaacgcctgtctcaacaacccctgc
cgcaacggcgggacctgcgacctgctcacgctgactgaatacaagtgccggtgccctcca
gggtggtcaggtaagacctgccagcaggcagatccctgcgcctccaacccctgcgccaac
ggagggcagtgtgtccctttcgaggcccactacgtctgcaagtgcacgaagggcttccat
ggacccaactgcaaacaggacttaaacgaatgcaacatcatccctcccgtctgcaagaac
ggaggcagctgcaccaacgagatcgggagctaccagtgttcctgcaagccagcctacacg
ggccagaactgcgagcacctctacatgccctgcaacccctcgccctgccagaacgggggc
acttgccgtcagaccagcgacaccacctacgactgcacctgtcttccaggttttgctggt
cagaactgtgaggacaacatcgatgactgtcctgggaacaactgcaaaaacgggggcacc
tgcgtggatggagtgaacacctacaactgccagtgcctccctgagtggacaggccagtac
tgcacggaagatgtcgatgagtgccagctcatgcccaatgcctgccagaatggagggacg
tgccacaacaaccatggcgggtacaactgtgtctgtgtcaatggctggaccggcgaggat
tgcagtgagaacattgacgactgcgccatggctgcctgcttccagggcgccacctgccac
gaccgggtggcctctttctactgcgagtgcccgcatggccgcacaggcttgttgtgccac
ctggatgacgcctgcatcagtaacccctgcaacgaaggctcaaactgcgacaccaaccca
gtcaatggcaaagccatctgcacctgcccgtcgggctacacggggccagcctgcaaccaa
gacatagacgagtgctcactaggagccaatccctgtgagcatgctgggaaatgcatcaac
acccaaggctccttccagtgccagtgtctccaggggtactcgggcccccgctgcgagata
gatgtcaacgaatgcctctccaatccgtgccagaacgacgccacctgcctggatcagatc
ggagaattccagtgtatctgcatgccaggttacgagggcgtttactgtgaaatcaacacg
gacgaatgcgccagcagcccctgcctgcacaacgggaactgcatcgacaagatcaacgag
ttctactgcgagtgccccacaggctttaatgggcacctgtgtcaatacgacgtcgacgag
tgcgccagcacgccgtgcaagaacggggctaagtgcctagacggccccaacacctacacc
tgcgagtgcacagaaggatttaccggcactcactgcgaaatcgacatcaatgaatgcgac
cctgacccctgccactacgggacctgcagggacggcatagctgccttcacctgtctctgc
caggctggctacacaggccaccgctgtgacatcaacatcaacgagtgccagagccagccg
tgcaaaaacggagggacctgccaggacaggaacaacgcctactactgcctgtgcctcaag
ggcaccacagggcccaactgcgaaatcaacctggacgactgtgctagcaacccgtgtgac
tacggcaagtgccaagacaagatcaatggctacgaatgtgcctgcgagccgggctacaca
gggagaatgtgcaacatcaacattgacgagtgcgccagcaacccgtgccacaacggcggc
acctgcaaggacggcattaatggcttcacatgcctctgccccgagggataccacgacccc
atgtgcgtgctggaagtgaacgagtgtaacagcaacccctgcatccacggcaaatgcaac
gatgggctcaatggctacaggtgtgattgtgacccgggctggagcgggacgaactgcgac
atcaacaacaacgagtgtgagtcaaacccgtgcgcgaatgggggcacctgcaaggatatg
accagtggctacatctgtacctgccgggagggattcagcgggcccaactgccaaaccaac
atcaacgaatgcgcctccaacccatgcctgaatcaggggacctgcatcgatgacgtagcc
ggctaccaatgcaactgtctcctgccatactcaggggctacgtgcgaggacgtgctggcg
ccgtgcgcggccgggccgtgtaagaatggcggggagtgccgagagtcagaggactacgag
agcttctcctgtgtgtgcccttcaggctggcaaggccaaacgtgtgagatcgacatcaac
gaatgcgtgaaaaacccctgccgccacggcgccacgtgccagaacacaaatggcagctac
tggtgcaactgcaaagcgggctacaccggccgcacctgcgacaccgacattgacgactgc
aagccaagtaagcgctggcgagcgtccgcgctcagagcgggtggccagcaccccagctgc
gagtgcgccagcaacccctgcaagaacggggccaactgcaccgattgcgtcaacagctac
acatgcacctgcccctccggcttcagcgggatccactgtgagaacaacacaccggactgc
acagaaagctcctgttttaatggggggacctgcgtggacggcatcaacaccttcacctgc
gtgtgcccccctggcttcacgggcagctactgtgagcacgacatcaacgaatgtgactct
aagccgtgcttgaacgggggcacctgccaggacagctatgggacctacaagtgcacttgt
ccgcagggctacaccggcctcaactgtcagaacctggtacgctggtgcgactcctctccc
tgcaaaaacggaggcaagtgctggcagacccacaacctgtaccgctgcgagtgcaacagc
gggtggacgggcctgtactgtgacgtccccagcgtctcctgtgatgtggctgcgaagcag
caagacgtcgacgtggcgcacctgtgcaggaactccggcctctgtgtggatactggcaac
acccacttctgccgctgccaggctggctacaccggcagctactgtgaggagcaggtggac
gagtgctccccgaacccctgccagaatggagctacatgcacggactacctgggaggctac
tcctgtgagtgtgttgctggctatcatggagttaactgctcagaggagatcaacgagtgc
ctgtctcacccatgccaaaacggaggaacctgcatcgatctcatcaatacctacaaatgc
tcctgccccagagggactcaaggggtgcactgcgaaatcaacattgacgactgcagccct
ttctttgatcccgtcaccctggggcccaagtgcttcaacaacggcaagtgcacggaccgg
gtgggcggctacagctgcgtctgcccacccggcttcgtgggggagcggtgcgagggggac
gtcaacgaatgcctgtccaacccctgcgacgtgcgggggacccagaactgcgtgcagcgc
gtcaacgactacaagtgtgaatgccggcaggggtacaccggtcgtcgctgtgacaccgtg
gtggacggctgcaagggcaagccctgcaggaacggcgggacctgtgcagttgcgagcaac
acaggccggggcttcatctgtaaatgccccccgggtttcgtgggcgccacttgtgaaaac
gactcgcgcacctgcgggaacttgcactgcctgaacggcggcacctgcatctccatccac
aagagctccaagtgcatgtgcgcccctgccttcacggggccagactgccagtaccccctc
agcagcccctgcacttccaacccttgttacaacgggggtacctgtgagttcttcagcgag
gcccccccgtattaccagtgcaactgccttgcaaacttcaacggcctctactgccacatc
ctggattttgatttccagggaggggtgggccaggatatcatcccgcccacgatcgaggag
aaatgcgagatccccgtctgcgccggcctcgcgggcaacaagatctgcgacgggaagtgc
aacaaccacccctgcggctgggacggaggcgactgttccctcaacttcaacgacccctgg
aagaactgctcccattccctgcagtgctggaaatacttcaacgacgggaagtgcgatgcg
cagtgcaacaactccgggtgtctgtacgacggctttgactgccagaaagtggaagggcag
tgcaatcctctgtatgaccagtactgtaaagatcacttttcagatggtcactgcgaccag
gggtgtaacaatgctgagtgtgaatgggacgggctggactgtgccaacaacatgcctgag
aaacttgcggatggcacattggtggtagtggtcctgataacccccgagaacctgaagaac
aactccttcaacttcctccgggagctaagccgcatccttcacaccaacgtggtcttcaag
aagaaccccaagggagagtacatgatcttcccctactacggcaacgaagaggagctgaaa
aagcaccacatcaagaggtcgacggagaactgggcagatgtgcccagcgcagtcttcaac
acagtaaagacgtccctctcatcgcgggtcagcggaagacagcggagagagctggatcag
atggatatcagaggatccatcgtctacttggaaatcgacaaccgccagtgcatcgtctcc
tcctcgcaatgttttcagagcgcaactgacgtggcagctttcctgggtgccttggcctcg
ctgggtaacctgaacatcccctacaaaatagaagccgttaaaagcgaaacagctgagctc
ccaaggaacacccagttatatcctatgtatgtggtggtggccgtcctggccttgctcgct
ttcatttgcgtgggagtcgtggtctctcgtaagcggcgcagggaacacgggcagctctgg
ttcccagaaggcttcaaagtgacggagtcgagcaagaagaagcgacgtgaaccgctgggg
gaggattccgtgggactgaaacccctgaaaaatgcgtctgatggcaccttgatggatgac
aaccagaatgaatggggtgatgaagaaaccttggacactaagaagttcaggtttgaggag
caggcgatgctgccggacgcggacgatcagaccgatcacaggcagtggacccaacagcac
ctggatgcagccgaccttcgcatctcttccatggcccccaccccgccgcaaggtgaaatt
gatgcagattgcatggatgtcaacgtgcgaggccctgatggattcaccccgctcatgatc
gcttcgtgcagtggaggaggcctggagacaggcaacagtgaagaggaggaagatgcccct
gctgtcatctcggacttcatctaccagggcgccagcctgcacaaccagactgaccgcacc
ggcgagacggctctccacctggccgcaagatactctcgctccgatgctgccaaacgcctg
ctggaggccagtgcggatgcaaacatccaggacaatatgggcaggacgccccttcatgca
gctgtctcggctgatgctcaaggagtcttccagatcctgattaggaaccgagccaccgac
ctggatgcccgcatgcacgacgggaccacgccgctgatcttggcagcacgcttggccgtg
gagggcatgttggaggatctgattaattgccacgcggatgtcaatgccgtggacgaccta
ggcaaatcagccctgcactgggccgcggctgtgaataatgtggaagctgccatggtgctg
ctgaagaacggagccaataaagacatgcagaacaataaggaggagactccgctgttcctg
gccgccagggaagggagctatgaaacggccaaagtcctcctggatcactttgccaaccgg
gacatcacagaccacatggaccggctcccacgggatatcgcgcaggagcgcatgcaccac
gacatcgtgcggctgctggacgagtataacctggtgcgcagcccgccgctgcataacggc
cccttgggggcgcccaccctgtctcctccgctctgctctcccaacggctacatcggcaac
ctgaaaccggccgcccaggggaagaaggccaggaagctgagtgccaagggcctgagctgc
cccagcaaagattccaaagacgccaaagccaggaggaaaaaatcgcaggatgggaaagga
ggccttctcgacagctccagcgtgctgtcgcccgtcgactccctggagtcgccccacggg
tacctctcggacgtcgcgtctcctcccctgatgacacctccgtttcagcagtccccgtcc
gtgcctctgaaccacctgccaggcctgccggacgcccacctgggtatcaaccatctcaac
atggcaggaaagcaggagatggcgatgggcggctccagcaggatggccttcgagtccatg
cccccgcgtctctcccacctccccgtctccagccccggcacagccctgagcagcgcgccg
atgaatttcacggtgggaggcgctaccagcctgaacgggcagtgcgattggctcacacgg
ctgcaaaacgggatggtgcagaaccagtataaccccatgagaagcaatgtccagcctggg
gctcaccagcaaagccaggccctgccccacggcatgatgacccccctgcacaacggcatg
cccaccacagccttgtcgcagatgatgagcttccagcccatgcctaacacccggctggcc
tcccagccacatctcatgcaggcccagcagatgcaacagatccagcagcagcagcagaat
ttacagcagcagctgcaacagcaaaatatgcagcagcagcagcagcagcatcacaacccc
agctcgaacgccaacggtcacattagccaaaatttcctcggtaacgagctcacccagtca
gacatgccacaggtgagcggcagcaccatgccggtgcacaccattttgcctcaagagacc
caaatcctctcaacgtctctcccatcctccctcacgcaacccatgaccaccacccagttt
ttaactccgccctctcaacacagttactcctcccccttggacaatacacccaatcaccag
cttcaggtgccagaccaccctttcttaacaccttccccagagtcgccagaccaatggtca
agctcatcgcctcattccaacatatctgattggtcagaggggatctccagccctcccacg
agtatgcagtcacagataggacacatcccagaagccttcaagtaa
DBGET
integrated database retrieval system
