Pelodiscus sinensis (Chinese soft-shelled turtle): 102462947
Help
Entry
102462947 CDS
T02980
Symbol
CLP1
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102462947 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102462947 (CLP1)
Enzymes [BR:
pss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
102462947 (CLP1)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102462947 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
ATP_bind_1
AAA_16
AAA_22
AAA_18
TniB
CbiA
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-GeneID:
102462947
NCBI-ProteinID:
XP_006111022
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MIPRLPKPEIGPMETPLPILSREPPGDRELHLPTGPALTRHAKSLLPRAAYPVELRPPAG
TAPPPPRRISGSGPFSHQALQLPTLPAPGVPSGLELPAGRFIARRQAYAGIEMAEEAGDE
KKQVAKFELERETELRFEVEASQTVQLELLTGMAEIFGTELTRNKKFTFDAGAKVAVFTW
HGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREDEQGPRVMVVGPTDVGKS
TVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSIQAPLVYHF
GSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASA
FEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDRXCFYPHAF
DVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTADGSEEN
ISETSVAGFIVVTGVDVDRQVFTDT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaggctgcccaagccagagatcggccccatggaaacacccctccccatcctt
tctagggagccgccaggagatcgggaactacatctcccgacaggcccagcgctcacccgc
catgccaagtccctacttccgagagcggcctacccagtcgaactacgtcccccagcaggc
accgcgccaccaccaccccgtcgcatttccggatccggccctttctcccatcaggcacta
cagctccctacacttccggcgcccggtgtgccttcgggcttggaacttccggctggtcgt
tttatcgcgaggcggcaggcttatgcagggatagagatggcagaggaggccggggatgag
aagaagcaggtggcaaagtttgagctggagcgggagacagagcttcgctttgaggtggag
gcctcgcagactgtccagctggagcttctgacaggcatggcggagatcttcggcactgag
ctgacccgcaataagaaattcacttttgatgctggtgccaaggtggctgtgttcacatgg
catggctgtacagtgcagctgagcggccgcactgaagtggcttatgtatcgaaggacacc
cccatgctcctctacctcaacacccatactgcccttgagcagatgcggcggcaggcagag
cgcgaggatgagcaggggccccgggtcatggtggtagggcctacagatgtgggtaagtcg
acagtgtgccggctgctgctgaactatgccgtgcggctggggcgccgacccacattcgtg
gagctggacgtgggccaaggctctgtctccatccctggcaccatgggagcactgtacatt
gagcggcctgctgatgtagaggagggcttctctatccaggcccccctcgtttatcacttt
ggctccaccactcctggcaccaacatcaaactctataacaagatcacatctcgcttggct
gacgtttttaaccagcgctgcgaagtgaaccgtcgggcttcagtcagtggctgtgtcatc
aacacgtgcggctgggtgaagggctctgggtatcaggccctggtgcatgcagcctcagcc
tttgaggtggatgtggtggtagtgctggaccaggaacgcctgtacaatgagctgaagcgg
gacctgccccattttgtgcgcacggtgttgctccccaagtcaggtggggtggtggagcgt
tcaaaggacttccggcgggaatgccgggatgatcgcnattgcttctacccccatgccttc
gatgtcaaattctctgatgtcaagatctacaaggtgggggcgcccaccatccctgactca
tgcctgcctctgggcatgtcacaggaggacaatcaactcaagcttgtgccagtgacacca
ggccgtgacatggtgcaccacttgttgagtgtcagcactgctgatggcagtgaggagaac
atctctgagaccagtgtggctgggttcattgttgtcactggggtggacgtagatcgccag
gtcttcacggacacctga
DBGET
integrated database retrieval system
