Pseudomonas syringae pv. tomato DC3000: PSPTO_0458
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Entry
PSPTO_0458 CDS
T00118
Symbol
soxA-1
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00260
Glycine, serine and threonine metabolism
pst01100
Metabolic pathways
Module
pst_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSPTO_0458 (soxA-1)
Enzymes [BR:
pst01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PSPTO_0458 (soxA-1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PSPTO_0458 (soxA-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
GIDA
DAO
Pyr_redox_3
FAD_binding_3
Pyr_redox
Thi4
AlaDh_PNT_C
Lycopene_cycl
DDR1-2_DS-like
Motif
Other DBs
NCBI-ProteinID:
AAO54002
UniProt:
Q88AD4
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All DBs
Position
complement(500811..503831)
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AA seq
1006 aa
AA seq
DB search
MSQSNRLPNGGRINRSKVLNFTFNGQTYQGFEGDSLASALLANGVEIIGRSFKYSRPRGI
FAAGSEEPNAVLQIGATEATQIPNVRATQQALYSGLVATSTNGWPSVNTDVMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDSYDAMNQHCDVLIVGAGP
AGLAAALAASRSGARVIIADEQEEFGGSLLDSRESLDGKPAAEWVATVVAELKSLRNVTL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGMVRQRMHRVRAKRVVLAAGTHERPLVYG
NNDVPGNMLAGAISTYVRRYGVAPGKKLVLSTNNDHAYRVALDWLDASLHVVAIADARHN
PRGPLVEEARAKGIRILTGSAVIEARGSKRVSAARVAAIDLKTHSVTSPGEWLECDLVAS
SGGYSPIVHLASHLGGKPVWREDILGFVPGEAPQKRICVGGVNGVYSLADSLADGFEGGV
RAASEAGFKIVEGVMPKALSRAEEPTLALFQVPHEKGTARAPKQFVDFQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVSIPEMGTTMFRPNYTPVTF
GAIAGRHCKHIFEPVRFTALHAWHIRNGAEFEDVGQWKRPWYFPKNGEDLPAAVARECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKL
LSEVTDIDLGREAFPFMTWKEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREQRKQLVGLKPIDSTQWLPEGAQLVFDTRQAIPMSMVGHVTSSYAHNSLGYSF
AMGVVKGGLNRIGEHVFAPLADGSVIEAEIVSSVFFDPKGERQNVE
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagcaatcgcctgcccaacggcggccgcatcaaccgcagcaaagtgctcaac
ttcaccttcaacggccagacctatcagggctttgaaggcgactcgctggcgtccgcgctg
ctggccaatggcgttgagatcattggtcgcagtttcaagtattcccggccacgcggcatc
ttcgcggcgggttcggaagaaccgaacgccgtgttgcagatcggcgcgaccgaagcgacg
cagatccccaacgtgcgcgccacccagcaagcgctttattcggggctggtggcgaccagc
accaacggctggccgagcgtaaacaccgacgtaatgggcattctgggcaaggtcggcggc
aaactgatgcctccgggcttctactacaaaaccttcatgtacccgcaatcgttctggatg
acgtacgaaaagtacatccgcaaggcggcaggcctcggtcgctcaccgaccgagaacgac
ccggacagctacgacgcgatgaaccagcactgtgatgtgctgatcgtcggcgcaggcccg
gctggtctggccgccgcactggcagcgagccgcagcggcgcccgagtgatcatcgccgat
gaacaggaagaattcggcggcagtctgctcgacagccgtgaaagcctggatggcaaaccc
gctgccgagtgggttgcaacagtagttgccgagctgaaaagcctgcgcaacgtgacactg
ctgccacgcgccacggtcaacggttatcacgatcacaattttctgaccatccacgagcgt
ctgaccgaccacctcggtgatcgcgcgcccatcggcatggttcgccagcgcatgcaccgg
gtgcgcgccaaacgtgtggtgctggctgccggcacgcacgagcggccgctggtctacggc
aacaacgatgtgccgggcaacatgcttgcgggtgcaatctcgacgtatgtacgtcgttac
ggcgtcgcgccgggcaaaaaactcgtgctgtccaccaacaacgaccacgcctaccgcgtc
gcgctggactggctcgacgccagcctgcacgtggtggcgattgccgatgcgcggcacaat
ccacgcggcccgctggttgaagaggctcgcgccaaaggcattcgtattctgaccggcagc
gccgtgatcgaagcgcgtggcagcaagcgggtgagcgctgcacgcgttgccgccatcgac
ctcaaaacgcacagcgtcaccagccccggcgagtggcttgagtgcgatctggtggcaagt
tccggcggttacagccccatcgtccatctggcctcgcacctgggcggcaagccggtctgg
cgtgaagacatcctcggtttcgtgccgggcgaagcgccgcagaaacgtatctgtgtgggc
ggcgtgaacggcgtctacagcctggcagacagcctggccgatggtttcgagggtggcgtg
cgcgctgccagcgaagcaggcttcaagattgtcgagggcgtgatgcccaaagccctcagc
cgcgccgaagaaccgacgctggcgctgttccaggtgccccatgaaaaaggcactgcacgg
gcgcccaagcaattcgtcgatttccagaacgacgtgaccgccgccgccattgaactggcg
acccgtgagggtttcgagtcggtcgagcacgtcaaacgctacaccgcgctgggcttcggc
accgatcagggcaagctgggcaacgtcaacgggctggccatcgcagcccgctcgttgaac
gtgtcgatcccggaaatgggcaccaccatgttccgccccaactacacaccggtcaccttc
ggcgcgattgccgggcgtcattgcaagcacatcttcgagccggtgcgcttcaccgcgctg
catgcctggcacatcagaaacggtgccgaattcgaagacgtcggccagtggaaacgcccg
tggtacttccctaaaaacggtgaagacctgcccgctgccgtggcgcgtgaatgcaaggcg
gtgcgtgacagcgtcggcctgctggacgcctcgacgctgggcaagatcgacattcaaggg
ccggatgcgcgcgaattcctcaaccgcatctataccaacgcctggaccaaactggacgtg
ggcaaggcccgttacggcctgatgtgcaaggaagacggcatggtcttcgatgacggtgtg
actgcctgcctcgccgacaaccacttcctgatgaccaccacgacgggcggtgctgcacgc
gtcctgcaatggctggaaatctatcagcaaaccgaatggccggacctgaaagtgtatttc
acctcagtgaccgatcactgggcgaccctgacgctgtctggccccaacagccgcaagctg
ctcagcgaagtgaccgatatcgacctgggccgtgaagcgttcccgttcatgacctggaaa
gaaggcttggtcgcaggcgtgccggcgcgggtgttccgtatctcgtttaccggcgagctg
tcctatgaggtcaacattcaggccgactacgcgatgggtgttctggaaaagatcgccgag
gccggcaagcagtacaacctgacgccttatggcactgaaaccatgcacgtactgcgcgcc
gaaaagggtttcatcatcgtcggtcaagacaccgacggctcgatgaccccggacgatctg
aacatgggctggtgtgtcgggcggaccaaaccgttctcgtggattggctggcgcggcatg
aaccgcgaagactgtgtgcgtgaacaacgcaagcaattggtcggcctcaaacccatagac
tcgacccaatggctaccggaaggcgctcagttagtgttcgacaccaggcaggcgatcccg
atgagcatggtcggccacgtgacctccagctacgcgcacaactcgctgggctattcgttc
gcgatgggcgtggtcaaaggcggcctgaaccggatcggcgagcacgtgttcgcgccgctg
gccgatggcagcgtgatcgaagccgagatcgtctcgtcggtgttcttcgacccgaagggc
gagcgtcagaatgttgagtaa
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