Pseudomonas syringae pv. tomato DC3000: PSPTO_2452
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Entry
PSPTO_2452 CDS
T00118
Symbol
soxB-2
Name
(GenBank) sarcosine oxidase, beta subunit
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00260
Glycine, serine and threonine metabolism
pst01100
Metabolic pathways
Module
pst_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSPTO_2452 (soxB-2)
Enzymes [BR:
pst01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PSPTO_2452 (soxB-2)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PSPTO_2452 (soxB-2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
FAD_binding_2
Pyr_redox_2
Thi4
FAD_binding_3
Pyr_redox_3
NAD_binding_8
FAD_oxidored
NAD_binding_9
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
AAO55961
UniProt:
Q883B6
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Position
complement(2708817..2710058)
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AA seq
413 aa
AA seq
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MPFNLLKYGLSSEYPVEVDLPAPKELKSSYDVVIIGGGGHGLATAYYLSKYHGITNIAVL
EKGYLGGGNTARNTAVIRSNYLTSEGVKFYAESVKMFQGLSNEFDFNIMYSERGQLTLAH
TDATVRSFRQRAEVNKHFGGRTEMIDRQQIRELVPSLNLDPGHLPVLAGLWHIDGGTARH
DAVAWGYAKQAAKRGVEIHQLTEVQELVIENGTITAVKTNRGTLQCGCAVQAVAGMSSQM
MKKAGIRSPIQTFPLQAMVTQPFKPFLDPLVSSSALHCYVQQTSRGEVVFGGGSDPYPLF
NSRSTLDLKESLLAHAIEMFPFLANAKLMRQWAGITDMTPDYSPIMGLSPVKNYYLDAGW
GTWGFKATPICGKTMAELVASGGKVPELIKPFGLERFSTFEQVNEMGATAASH
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcaatttactgaaatacgggctcagctcggagtacccggtcgaggtggatctg
ccggcgcccaaggaactcaaatcctcgtatgacgtggtgatcatcggcggcggcggtcat
gggctggcaaccgcttactacctgtcgaaataccacggcatcaccaatatcgcggtgctg
gaaaaaggctacctgggcggcggcaacaccgcgcgcaacaccgccgtgatccgctccaac
tacctgaccagcgagggcgtgaagttctatgccgagtcagtgaagatgtttcagggcctg
tccaacgaattcgatttcaacatcatgtactccgagcgcggccaactgaccctggcgcac
accgacgccacggtgcgttcgttccgccagcgcgccgaggtcaacaaacatttcggcggc
cgtaccgagatgatcgaccgccagcagatccgcgaactggtgccgagcctcaatctggac
cctggccatctgccggtattggcaggcttgtggcacatcgacggtggcaccgcgcggcac
gatgcggtcgcctggggctacgccaagcaggccgccaagcgtggcgtggagattcatcaa
ctgaccgaagtgcaggaactggtgatcgagaatggcaccattacggcggtgaaaaccaat
cgcggcaccctccagtgcggctgcgcggtgcaggcggtcgcgggcatgagctcgcagatg
atgaaaaaggccggtattcgctcgccaatccagaccttcccgctgcaagcgatggtcact
cagcctttcaagccctttctcgacccgctggtgagttcgtccgccctgcactgctacgtg
cagcagaccagccgtggcgaggtggtgttcggtggaggctcggacccgtacccgctgttc
aacagccgctcgacgctggacctcaaggaaagcctgctggctcatgccatcgagatgttt
ccgtttctggccaacgccaaattgatgcgccaatgggccggtatcactgacatgaccccg
gattacagcccgatcatgggcctgtcaccggtcaagaattactacctggacgcaggctgg
ggcacctgggggttcaaggccacgccgatctgcggcaaaaccatggcagagctggtggcc
agcggcggcaaagtgccggagctgatcaagccgttcggcctggaacgtttctcgaccttt
gagcaagtcaacgaaatgggcgccacagcggccagccactga
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