Phreatobacter stygius: E8M01_24850
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Entry
E8M01_24850 CDS
T05955
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg00330
Arginine and proline metabolism
pstg00480
Glutathione metabolism
pstg01100
Metabolic pathways
pstg01110
Biosynthesis of secondary metabolites
pstg04148
Efferocytosis
Module
pstg_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
E8M01_24850
09106 Metabolism of other amino acids
00480 Glutathione metabolism
E8M01_24850
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
E8M01_24850
Enzymes [BR:
pstg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
E8M01_24850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
NUP50
Motif
Other DBs
NCBI-ProteinID:
QCI67179
UniProt:
A0A4D7B0K1
LinkDB
All DBs
Position
complement(5272321..5274678)
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AA seq
785 aa
AA seq
DB search
MEYFRRFTFLFATPAFDTDDLEGIRFNQIVEEIERSGFEVVKARKLEDAEIAVQTDAAIG
CMVVDWGKKGLEGKTAALINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPAFIAKNLVSRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGVFYSRSPIGRVFM
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALQAQKEAAKIFGAEKTYFVLNGTSTSNKVAL
AALVTDGDLVLFDRNNHKAAHHGALLIGGGIPVYIPTVRNAWGLIGPMCWEAFDEEALRE
RIRTHPLVKDPEAWRKPRPFRVAVVEQCTYDGTIHSAEMILKRIGHLCDYILFDEAWAGF
MKFHPLYAGRFAMGLQDLGPDAPGIIATQSTHKQLASFSQASQIHMKDRHIRGQKRRVEH
RRFNESFMQYASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAVRREF
EEKEARPERRWFFEPFVPDRVEIPDVSRDGGVHHVAWETVGTDQLATNPAYWQLAPDAAW
HGFAGMTPGFAMTDPNKLTLLTPGFDRATGTYAEHGIPAPVVAQYLRENRIVAEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKKLHDDNVLLEEAIPEFFRRRPARYAGVRLRDLCAD
MHRFFRDANVSALQAKQFSAGHLPEIAMSPHDAARCLTRNDVDYLPIDAIAGRIATTPFV
VYPPGIATIVPGERLTERAQPMIDYLKMFETCFNTFPGFEVEIQGLYREIDASGRVRLHT
YVVSE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaatatttccgacgattcaccttcctgttcgcgacaccggccttcgacaccgatgac
ctcgagggcatccggttcaaccagatcgtcgaggaaatcgagcgatccggtttcgaggtg
gtcaaggcgcgcaagctggaggacgccgagatcgcggtgcagaccgatgccgccattggc
tgcatggtggtcgactggggcaagaagggcctggagggcaagaccgcggcgctgatcaac
ctgatgcgccgtcgcggtctcgacttcccgatcatcctgttgatccgccgcaagcgcttc
gaggatctgccggtcgaggtgctcgacttcatcgacggctacgtcttcctctccgaggag
acgcccgccttcatcgccaagaatctcgtcagccggctcaaacaatatgccgagacgctg
aagacgccgttcttcggcgcgctggtcgactacgccgaagagggcaaccagctctggacc
tgcccgggccataatggcggcgtgttctactcgcgcagcccgatcggccgggtgttcatg
gaacatctcggcgaggcggtgttccgcgacgacctcgacaattccgtgctcgacctcggc
gacctcctgacccatgagggcccggccctgcaggcgcagaaggaagccgccaagatcttc
ggcgcggaaaagacctatttcgtgctcaacggcacctcgacctccaacaaggtggcactc
gccgcgctcgtcaccgatggcgacctggtgctgttcgaccgcaacaaccacaaggccgcc
caccacggcgccctgctgatcggcggcggcattcccgtctatatccccaccgtccgcaac
gcctggggactgatcgggccgatgtgctgggaggccttcgacgaagaggcgctgcgcgag
cgcatccgcacccatccgctggtcaaggacccggaagcctggcgcaaaccacgaccattc
cgcgtcgccgtggtcgagcagtgcacctatgacggcacgatccacagcgccgagatgatc
ctcaagcgcattggccatctctgcgactacatcctgttcgacgaggcctgggccggcttc
atgaaattccacccgctctatgccgggcggttcgccatggggctccaggacctcggtccg
gatgcgccaggcatcatcgcgacccagtcgacccacaagcagttggcgagcttctcgcag
gcctcgcagatccacatgaaggaccgccacatccgtggccagaagcggcgggtcgagcac
cggcgcttcaacgagagcttcatgcaatatgcctcgacctcgcccttctatccgctgttc
gcgtccctcgacgtcggcgcgcagatgatgaaggggcgctcgggcgaggtgttgtgggac
gatacgatccggctcggcatcgagctgcgcaagaagatccgcgccgtgcgccgcgagttc
gaggaaaaggaagcgcggcccgagcgccgctggttcttcgagcctttcgtgccggaccgg
gtggaaattcccgatgtctcgcgcgacggcggcgtgcatcacgtcgcctgggagacggtc
ggcaccgaccagctcgccaccaatccggcctattggcaattggcgcccgatgccgcctgg
cacggctttgccggcatgacgccgggcttcgccatgaccgacccgaacaagctgacgctg
ctgacgcctggcttcgaccgcgccaccggcacctatgccgaacacggcatccctgccccg
gtggttgcccaatatttgcgtgagaaccgcatcgtcgccgagaagaacgacctcaattcg
ctgctcttcctgctgacgccgggggtcgaggccagcaaggccggcacgctgatcagcggg
ctcgtcgccttcaagaagctgcacgacgacaatgtgctgctggaagaggccatcccggaa
ttcttcaggcgccggccggcgcgttatgccggcgtgcgcctgcgcgatctctgcgccgac
atgcaccgcttctttcgcgacgccaatgtcagcgccctgcaggccaagcagttttcggcc
gggcacctgcccgagatcgccatgtcgccccatgacgcggcgcgctgcctgacccgcaac
gacgtcgactacctgcccatcgacgcgattgccggccgcatcgcgacgacgcccttcgtg
gtctatccgccgggcatcgccaccatcgtgccgggtgagcggctgaccgagcgggcacag
ccgatgatcgactatctcaagatgttcgagacctgtttcaacaccttccccggcttcgag
gtggagatccagggcctctaccgcgagatcgatgcgtcgggccgcgtcaggcttcatacc
tacgtcgtctccgaatag
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