KEGG   Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_007580
Entry
Pst134EA_007580   CDS       T09520                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pstr  Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03020  RNA polymerase
pstr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pstr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Pst134EA_007580
  09124 Replication and repair
   03420 Nucleotide excision repair
    Pst134EA_007580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pstr03021]
    Pst134EA_007580
   03400 DNA repair and recombination proteins [BR:pstr03400]
    Pst134EA_007580
Transcription machinery [BR:pstr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Pst134EA_007580
  RNA polymerase III system
   RNA polymerase III
     Pst134EA_007580
  RNA polymerase I system
   RNA polymerase I
     Pst134EA_007580
DNA repair and recombination proteins [BR:pstr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Pst134EA_007580
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 72024920
NCBI-ProteinID: XP_047809768
LinkDB
Position
4:complement(4544103..4545340)
AA seq 153 aa
MSDAGDDYGNGGDFGDVQDFVGSEEEYGGEDGREMEEEGAGELNGQHVDGADPNSATGVV
HSGMPGEGALAGQPNKIRTTTPYMTKYERARILGTRALQISMNAPVLVPLDGESDPLEIA
MKELSQRKIPLIVRRYLPDGSYEDWSVSELIAD
NT seq 462 nt   +upstreamnt  +downstreamnt
atgtcggacgctggagacgattacgggaatggaggtgattttggggatgtccaagacttc
gtagggtcagaggaagagtatggaggagaagatggaagagagatggaagaagaaggtgcc
ggtgaacttaatggtcaacacgtcgacggagctgatcccaatagcgcaactggtgtagtt
catagtggaatgcctggtgaaggcgctttagcaggtcagccgaataagattagaacgact
acaccatatatgaccaagtatgaacgggcacgaatattgggtacacgagccttacagatc
agtatgaatgcaccagtcttagttcctctagatggagaatcagatccgcttgagatcgca
atgaaagaactcagtcaacgcaagattcctcttatcgttcgtcgctatcttcctgatgga
agttatgaagattggagcgttagcgaattgatcgccgattga

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