Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_024143
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Entry
Pst134EA_024143 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pst134EA_024143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_024143
Enzymes [BR:
pstr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pst134EA_024143
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
Pst134EA_024143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
ABC2_membrane_7
Motif
Other DBs
NCBI-GeneID:
72032839
NCBI-ProteinID:
XP_047800466
LinkDB
All DBs
Position
13:complement(411936..416642)
Genome browser
AA seq
1221 aa
AA seq
DB search
MATGVPSTSKLDGPPPASSSFGTLKRENTFRHPSTQATENPAIHELIAPHVTSFNALFDG
PDGSPGLLGLAIADLPSKVVFDSERQAGEHRDSRNRLEFKITELMVSNPLAMEKGQGALR
DRIYPTEARERLTTYAGKISAKVTWSLNNGTPQNEYRDFGLLPIMVKSEKCNLKGMSPAK
HVYHNEESEEMGGYFIVNGNEKIIRCLIVPRRNHVTSLIRSSFVNRGNFYTSFATQIRCV
RPDQTSQTNTLHYLSNGTITFRFSWRKNEYMVPVVMLLKALIGASDQEIFTGLAQNAFED
TFRTDRIELMLRNFQYYALPTSSACLDFLGSKFKVVLGCPDDWSSEQIGRYLTQRIVLVH
LKDPISKYRLLLFMIQKLYALVAGECCADNPDSPQHQEILLPGHLLSSIMKERFEEYLGG
IQAQIASEVRKSTAGVNFSDNKFVTKAMSKVYSDIGRRVTFFLATGNLVSPTGLDLQQAS
GFTIIAEKLNFYRYISHFRCVHRGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLL
NHFAHKCKILTSTPSVKNIPSLLVSMGMSQPFDTTIHPTKFVSVQLDGQIIGWASSSLCS
RIATALRTWKTEGLEGIPLELEIGLVPRSKGGQYPGLFLFSNPARMMRPVQLLSNNKTDL
VGSFEQVYMDIACSPEEIDPGFSTHVEISPTHVLSLLANLTPFSDFNQSPRNMYQCQMSK
QTMGTPSGVIHHRTDNKLYRLQTGQTPIVRPALHDVYQMDHFPNGTNAVVAVISYTGYDM
EDAMILNKSAHERGFGHGTIYKSMIVDLAPEGTRTNTSEKYFGFGTTVGSGSETSLFAKM
CDKLDGDGVVHIGARLRSGDPLAAYVDSTTGKTSFEKYKGDEEAYVEEVRMIGGDNAKEC
KKIHFKLRVPRSPVIGDKFSSRHGQKGVCSQKWPSIDMPFSESGIQPDVIINPHAFPSRM
TIGMFVESLAGKAGAMHGIAQDATPFRFNEEDTPSAFFGEQLRAAGYNYHGNEPMYSGIT
GKEFEADIYIGLVYYQRLRHMVGDKWQVRTTGKVDKLTRQPVKGRKRGGGIRFGEMERDA
LLAHGTSFLLQDRLMNCSDYSTAWICKRCGLLSSLGYDLSDEIDSSSSHQRYHSQLGTDP
TYSSSVKIRGPHGEYCRQCEPDRLRYDDDHLKSNRQENGQSLENLSDQFTNHMDVIAIPY
VFRYLVAELMAMGIKIALQVN
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggagtaccatcaacgagtaaattggatggaccaccaccagcctcatcctca
ttcggcacactcaaaagagaaaacaccttcagacatccatcaactcaggcaaccgaaaac
ccagccatacacgaactcattgcacctcatgtcacttcattcaacgcactcttcgatggg
ccagatggttctcccggtttgctcggtctagccattgccgacttaccctccaaagtggta
tttgattccgagagacaggctggcgaacatcgtgattcaaggaatcgtttggagtttaag
attacagaattgatggtctcaaacccactggcaatggaaaaaggacaaggtgcacttcgg
gataggatttacccaactgaggcacgtgaaagacttacaacatatgctggtaagatttct
gctaaggttacatggtcactcaacaacggtacacctcagaatgaatatcgggatttcggt
ctgcttccgatcatggttaaatcagagaaatgtaacctcaaagggatgagcccggccaaa
catgtctatcacaacgaagaatcagaagagatgggtggatacttcatagtaaatggtaat
gagaagattattagatgtctgatagtacctcgaaggaatcatgtcacatctctcatccga
tcatcatttgtaaaccgagggaacttctatacgagctttgctacacaaatcagatgtgtc
cgaccggatcaaaccagtcagacgaacactttacattacctctcgaatggaacgatcacc
ttcagattcagttggcgtaagaacgaatatatggtgccagtagtcatgttactcaaagct
cttatcggtgcaagtgatcaagagatctttaccggtctcgctcaaaacgctttcgaagat
acttttaggaccgatcgaatcgaactcatgctccgtaactttcaatactatgctctaccc
acctcctctgcctgtctcgacttcctgggttcaaaattcaaagtcgtgctaggttgtcct
gacgattggagttctgaacaaatcggaaggtatctaacgcagaggatcgtcctcgtccat
ctcaaagacccgattagcaaatatcgtctactactatttatgattcaaaaactatatgcc
ttagttgccggcgagtgttgtgcagacaatccagattcaccgcaacaccaagagattcta
ttaccgggacatctattatcatcaatcatgaaagagagatttgaagaatatctgggaggt
atacaagcccagatcgccagcgaagtccgtaaatcgacagcaggggtcaatttttccgat
aataaatttgtaacaaaagctatgagcaaagtatattctgatatcggtagacgagtcact
ttcttcctcgctactggaaatttagtctctcctactggtctcgatcttcaacaagctagt
ggatttacgatcattgccgaaaaacttaacttttaccgttatatctctcactttagatgt
gtccatcgaggtgctttcttcgccgaattgaaaactaccaccgtccgaaaacttctaccg
gaggcatgggggttcttatgtcccgttcacacacctgatggttccccctgtggactactg
aaccatttcgcccataagtgtaaaattttaacctcgacaccttcggtcaagaacatacca
tctctgctggtctctatgggaatgagccaaccctttgacacgaccatccaccccaccaaa
ttcgtctcagttcaattagatggccaaattattggatgggcctcttcatcactctgttct
agaatagcaacagcacttcgaacctggaagactgaaggcctagagggtatcccactcgaa
ttagaaatcggcttagtaccgagatcaaagggagggcaatatccaggattattcttattt
tcaaatcctgctagaatgatgagaccggttcaattattatcgaacaataaaaccgatcta
gttggatcattcgaacaagtttatatggatatcgcatgttctccggaagaaattgatcca
ggatttagtactcatgtagaaatttcacctacacatgttttatcattattggccaaccta
acaccattctcagatttcaatcaatcacctcgaaatatgtatcaatgtcagatgagtaaa
cagactatgggtaccccatctggagtcatacaccatcgaaccgataataaactttaccga
ctccaaacaggccaaacaccaatcgtccgaccggccctacacgatgtatatcagatggat
cacttccccaatgggaccaatgctgtggtcgcggtcatttcgtatacagggtatgatatg
gaagacgcgatgatattgaataaatcagcacatgagagaggatttggacatggaactata
tataaatctatgattgttgatcttgcacctgaaggcactcgaaccaatacgtctgagaaa
tatttcggtttcggaactactgttggttctggttcagagactagtctatttgctaaaatg
tgtgacaaactcgatggtgatggtgtcgttcacatcggtgctcgtcttcgctctggtgac
ccactcgccgcttatgtcgattctactaccgggaaaactagcttcgaaaaatataagggg
gatgaagaagcttatgttgaagaagttagaatgattggaggagataatgcgaaagaatgt
aaaaagatacatttcaaattacgtgtacccagatcaccagtaatcggagacaagttttca
tcacgtcatggacagaagggagtgtgttcacaaaaatggccttcgatagatatgccattc
agtgaatcgggtatccaacctgacgtcatcatcaaccctcacgcttttccttcacgaatg
actatcggcatgtttgtcgaaagtttagctggtaaagctggggctatgcatgggatcgct
caagatgctaccccattcaggtttaatgaagaagatacaccatctgcattctttggagaa
caactaagagcagccggatataattatcatggtaatgaacctatgtatagtggtattact
ggaaaagaattcgaggccgatatttatataggtttagtttattatcaacgtcttcgtcac
atggtgggagataaatggcaagtaagaacgactggaaaggtggataaattaactcgtcaa
cccgtgaaaggacgtaaaagaggaggaggaatcagatttggagagatggaaagagatgca
ttattagcccatggaacctcatttttactccaagatagattaatgaattgttcagattac
tcaacagcatggatctgtaaaagatgtggattattaagttcattaggatacgacctaagt
gacgagatcgatagctcatcctcccatcaacgctatcattctcaacttggtaccgatcct
acttattcttcttctgtcaaaatcagaggtcctcatggtgaatattgtagacaatgtgaa
cccgatcgtctcagatatgatgatgatcatctcaagtctaatcgtcaagagaatggtcaa
agcttggaaaatctttcggatcaattcactaatcatatggacgttatcgctattccttac
gttttcagatatttggtcgctgaattaatggctatgggaattaagatcgctttacaagtc
aattaa
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integrated database retrieval system
