Stutzerimonas decontaminans: UIB01_13315
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Entry
UIB01_13315 CDS
T03366
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pstu
Stutzerimonas decontaminans
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pstu03009
]
UIB01_13315 (rimO)
Enzymes [BR:
pstu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
UIB01_13315 (rimO)
Ribosome biogenesis [BR:
pstu03009
]
Prokaryotic type
ribosomal protein modification factors
UIB01_13315 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
RNase_II_C_S1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AHY43403
UniProt:
A0A023WTD5
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All DBs
Position
2853441..2854766
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AA seq
441 aa
AA seq
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MSGATPKVGFISLGCPKATVDSERILTQLRMEGYQIVPSYEDADVVVVNTCGFIDSAKAE
SLDAIGEAIAENGKVIVTGCMGVDENNIRGVHPSVLAVTGPQQYEQVVNAVHEVVPPNIE
HDPFVDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKEVLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEELGKMGVWVRLHYVYPY
PNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVDGAPAEAMDLEPVPDEIKQERW
DRFMAHQQAISAERLQRKVGQELDVLIDEVDEDGAIGRSWADAPEIDGMVYVDSAQPLQP
GDKVRVRVTNADEYDLWAEVI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgctacacctaaagtcggcttcattagtctcggatgccccaaggcaacggtc
gactctgaacgcatcctcacgcagctgcgcatggagggttaccagatcgtgccgtcctac
gaggatgccgatgtggtggtggtcaacacctgcggtttcatcgacagcgccaaggccgaa
tcgctggacgccattggcgaggcgatcgccgagaacggcaaggtgatcgtcaccggctgc
atgggcgtggacgagaacaacatccgcggcgtgcaccccagcgtgctggcggtcaccggc
ccgcagcagtacgagcaggtggtcaacgcggtacatgaagtggtgccgccgaacatcgag
cacgaccccttcgtcgatctggtaccgccgcagggcatcaagctcaccccgcgccactac
gcctatctgaagatttccgaaggctgcaaccatacgtgcagcttctgcatcatcccgtcg
atgcgcggcaagctggtcagccggccggtgggcgatgtgctcagcgaagccgagcgcctg
gtcaaggcaggcgtcaaggaagtcctggtgatcagccaggacaccagcgcctatggcgtc
gacctcaagtacaagctggatttctggaacggccagccggtcaagacgcgcatgctcgag
ctgtgcgaggagctgggcaagatgggcgtctgggtgcgcctgcactacgtctacccctac
cccaacgtcgacgacgtgatcccactgatggccgccggcaagatcctgccgtacctggac
atccccttccagcacgccagcccgaaggtgctcaaggccatgaagcgcccggccttcgaa
gacaagaccctggcgcgcatcaagaagtggcgcgagatctgcccggagctgaccatccgc
tcgaccttcatcgtcggcttccccggcgagaccgaagaagatttccagtatttgctcgac
tggctgaccgaagcccagctcgaccgcgtcggctgcttccagtattcgccggtcgacggc
gcgccggccgaggctatggaccttgagccggtgccggacgagatcaagcaggagcgctgg
gaccgtttcatggcgcaccagcaggccatcagcgccgagcgcctacagcgcaaggtcggc
caggagctggacgtgctgatcgacgaggtggacgaggacggcgccattggccgctcgtgg
gccgatgctccggagatcgacggcatggtctacgtcgacagcgcacaaccgctgcagccc
ggcgacaaggtccgcgtacgcgtcaccaacgccgacgagtacgacctctgggccgaagtg
atctga
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