Pseudomonas sp. VLB120: PVLB_08625
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Entry
PVLB_08625 CDS
T02897
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00330
Arginine and proline metabolism
psv01100
Metabolic pathways
psv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PVLB_08625
Enzymes [BR:
psv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PVLB_08625
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Colicin-DNase
Motif
Other DBs
NCBI-ProteinID:
AGZ34525
UniProt:
A0AA86DTE0
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All DBs
Position
1962169..1964418
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AA seq
749 aa
AA seq
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MYKDLKFPILIVHRAIKADSVAGERIRGIAEELSQDGFAILAAADHAEARLVAATHHGLA
CMLVAAEGVGENTHLLQNMAELIRLARLRAPDLPIFALGEQVTLENAPAEAMGELNQLRG
ILYLFEDTVPFLARQVARAAHNYLDGLLPPFFKALVQHTAQSNYSWHTPGHGGGVAYRKT
PVGLAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAAAEARAARNFGADHTFFVINGTS
TANKIVWHAMVGRDDLVLVDRNCHKSVVHAIIMTGAIPIYLCPERNELGIIGPIPLSEFS
AEAIRAKIQANPLARDRGARIKLAVVTNSTYDGLCYHAGLIKQALGASVEVLHFDEAWFA
YAAFHEFFDNRYAMGTVCEADSPLVFSTHSTHKLLAAFSQASMIHVQDGAQRQLDRDRFN
EAFMMHISTSPQYSILASLDVASTMMEGPAGRSLLQEMFDEALSFRRALANLREHIAADD
WWFSIWQPTTAEGIHRLAVQDWLLQPGAQWHGFGEVADDYVLLDPLKVTLVMPGLDAGGV
LGEHGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRHYDGN
TALSACLPSVVAVAPVRYQGMGLRDLCNQLHDCYRANATAKQFKRLFTRLPEVVMSPAQA
YDRMVRGEVEAVPIEALLGRVAAVMLVPYPPGIALIMPGERFTETTRSILDYLVFARAFD
SGFPGFVADVHGLQHENGIYTVDCIKECE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggacctcaagttccccattctcattgtccaccgggcaatcaaggccgacagt
gttgccggggagcgtatacgcggtatagccgaggagctgagccaggacggtttcgccatc
ctcgccgcggccgaccatgccgaggcccgtctggttgccgccactcaccacggactggcg
tgcatgctggtcgccgccgaaggtgtcggcgagaatacccacctgctgcagaacatggcc
gagttgattcgcctggcacgcctgcgtgccccggacctgcctattttcgccctgggcgag
caggtcacgttggagaatgcgcccgccgaggccatgggcgagctcaaccaactgcgcggc
atcctctacctgttcgaagacaccgtgccattcctggcacggcaagtggcccgagccgct
cataattatctcgatggcttgctgccgccattcttcaaagccttggtccagcataccgcg
caatcgaactattcctggcacacccccggtcatggcggtggcgtggcctaccgcaaaacc
cccgtaggcttggcgtttcatcagttcttcggggaaaacaccctgcgttccgacctctcg
gtttcagtgcccgagctcggctcgctgctcgatcacaccggcccactggcagctgcggag
gcccgcgccgcccgcaacttcggtgccgaccacacgttcttcgtgatcaatggtacctcg
acggccaacaagatcgtctggcatgccatggttggccgtgacgacctggtactggtagac
cgcaactgccacaagtcggtagtgcatgcgatcatcatgaccggggccatccccatctac
ctgtgcccggagcgcaacgagctgggcatcatcggcccgatcccgctcagtgagttcagt
gccgaggccatccgggcgaaaatccaggccaaccctcttgcgcgcgaccgtggagcccgg
atcaagctggcggtggtgaccaactctacctacgacgggctgtgctaccacgccgggttg
atcaaacaggcgctgggtgccagcgtcgaggtgttgcatttcgatgaagcctggttcgct
tatgcggcatttcatgagttcttcgacaatcgctacgccatgggcactgtctgtgaggcg
gacagcccgctggtgttcagcactcactcgacccacaaactgctcgccgccttcagccag
gcatcgatgatccacgtgcaggatggcgcgcagcgccagctggaccgcgaccgcttcaac
gaagcgttcatgatgcatatttccacgtccccgcaatacagcatcctggcttcgctggac
gtggcatcgaccatgatggagggccccgccggacgttcactgttgcaggaaatgttcgac
gaggccctgagttttcgccgggccctggccaatttgcgtgaacacatcgcagcggatgat
tggtggttcagtatctggcagccgacgaccgccgagggcatccaccgcctggcggtacag
gattggttgctgcagccgggcgcccagtggcatggttttggtgaagtggcggacgactat
gtgctgctggacccgctcaaggtcacgctggtcatgccagggctcgatgccggcggcgtg
ctgggcgagcatggtattcccgcagcggtggtcagcaagttcctctgggagcgggggctg
gtggtggagaagacggggttgtacagcttcctggtgctgttctccatgggcatcaccaaa
ggcaaatggagcaccttgctcaccgaattgctcgagttcaaacgccattacgacggcaac
acggcattgagcgcttgcctgcccagtgtcgtggcggtggcacctgtgcggtaccagggc
atgggcctgagggacctgtgcaaccaactgcacgattgctaccgcgccaatgctaccgcc
aagcagttcaagcgtttgttcacacgcttgcccgaggtggtgatgagcccggcccaggcc
tatgaccgcatggtgcgcggcgaggtggaagcggtgccgatcgaggcgctgctggggcgg
gtcgcggcggtgatgctggtgccgtatccgccgggtatcgccctgatcatgccgggcgaa
cgctttaccgaaaccacccgctcgattctcgattacctggtgttcgcccgcgctttcgac
agcggctttcctggcttcgtcgccgatgtgcatgggctgcagcacgagaacggcatctac
acggtggactgcatcaaggaatgcgaatga
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