Pseudoliparis swirei (Mariana hadal snailfish): 130187941
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Entry
130187941 CDS
T09868
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00510
N-Glycan biosynthesis
pswi00513
Various types of N-glycan biosynthesis
pswi00514
Other types of O-glycan biosynthesis
pswi00515
Mannose type O-glycan biosynthesis
pswi00533
Glycosaminoglycan biosynthesis - keratan sulfate
pswi00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pswi01100
Metabolic pathways
Module
pswi_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
pswi_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
130187941 (si:dkey-199f5.8)
00513 Various types of N-glycan biosynthesis
130187941 (si:dkey-199f5.8)
00515 Mannose type O-glycan biosynthesis
130187941 (si:dkey-199f5.8)
00514 Other types of O-glycan biosynthesis
130187941 (si:dkey-199f5.8)
00533 Glycosaminoglycan biosynthesis - keratan sulfate
130187941 (si:dkey-199f5.8)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
130187941 (si:dkey-199f5.8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130187941 (si:dkey-199f5.8)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
130187941 (si:dkey-199f5.8)
2.4.1.90 N-acetyllactosamine synthase
130187941 (si:dkey-199f5.8)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
130187941 (si:dkey-199f5.8)
Glycolipid
130187941 (si:dkey-199f5.8)
BRITE hierarchy
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
130187941
NCBI-ProteinID:
XP_056261912
LinkDB
All DBs
Position
22:complement(3023623..3039627)
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AA seq
399 aa
AA seq
DB search
MISIQSKWRYLFMFLGIQLVVMALLSREGYQKRVSYFIRIFRKPDATSSSGRNHTAAVIG
GGDVYANLSHLSKTHSQGDEMPYCPKTSPLIGGPIHVSFPSGLTTAQVQRKNPLVVRGGR
YRPPDCEARHRTAIIIPHRHREHHLKFLLYYLHPFLQRQQLNYGIYIIHQAGNYTFNRAK
LMNVGFREAMREEDWDCLFFHDVDLIPEDDRNTYVCDSNPKHAAIAMDKFGYKLPYKMYF
GGVSALTPLHYLKINGFPNNYWGWGGEDDDIGIRVTLGGMYITRPSVKVGRYKMIKHKLD
KGNGVNPKRFNMLAKTRQTWRLDGMNTAEYETISRQYLPLYTNITVNIGTEAGLHPPPPP
PPAKAAVEKTAQAPAKGSAQPPATLEESHAENASATSDR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcatccagtccaaatggcgctaccttttcatgttcctgggcattcagctggtg
gtcatggcgctgctgtcccgagagggataccagaagagggtctcctacttcatccgcatc
ttccgaaagcccgacgccacgagttcgtcaggccgcaaccacacggcggcggtcatcggc
ggcggggacgtgtacgccaacctctcccacctatccaaaacccacagccagggagatgaa
atgccttactgccctaagacgtcccctcttattggtgggccgatccacgtcagctttccg
tcggggctcacgaccgcacaggttcagaggaaaaaccccttggtggtgcgaggaggacgc
tacaggccgcccgactgcgaggcgaggcaccggacggccatcatcatcccccacagacac
cgagaacaccacctgaagttcctgctgtactacctgcatccttttctccagcgacagcag
ctcaactatggaatttacatcattcaccaggcggggaactacactttcaacagggccaag
ctgatgaatgtgggtttccgggaggccatgagggaggaagactgggactgcctcttcttc
cacgacgtggacctcatccccgaggacgatcgcaacacgtacgtctgcgactccaacccc
aagcacgccgccatcgccatggacaagttcggctacaagcttccgtacaagatgtacttt
ggaggcgtgtcggctctgacgccgctgcactacctcaagatcaacggctttcccaacaac
tactggggttggggtggagaggacgacgacattgggatcagagtgaccctgggggggatg
tacatcactcgtccatcggtgaaagtcggtcgctacaagatgataaaacacaagctggac
aaaggcaacggcgtgaacccaaagaggttcaacatgctggccaagacgcggcagacctgg
aggctggacgggatgaacacggccgaatacgagacgatctcccggcagtacctgcctctt
tacaccaacatcaccgtgaacatcggcaccgaggccggtctgcatccgccgccgccgccg
cctcctgccaaagctgcagtggaaaaaactgcccaggccccagcgaaaggatccgcccaa
ccgcctgccactctcgaagagagccacgcggagaacgcgtccgccacgagtgaccgctaa
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