KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130187941
Entry
130187941         CDS       T09868                                 
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00510  N-Glycan biosynthesis
pswi00513  Various types of N-glycan biosynthesis
pswi00514  Other types of O-glycan biosynthesis
pswi00515  Mannose type O-glycan biosynthesis
pswi00533  Glycosaminoglycan biosynthesis - keratan sulfate
pswi00601  Glycosphingolipid biosynthesis - lacto and neolacto series
pswi01100  Metabolic pathways
Module
pswi_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
pswi_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    130187941 (si:dkey-199f5.8)
   00513 Various types of N-glycan biosynthesis
    130187941 (si:dkey-199f5.8)
   00515 Mannose type O-glycan biosynthesis
    130187941 (si:dkey-199f5.8)
   00514 Other types of O-glycan biosynthesis
    130187941 (si:dkey-199f5.8)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    130187941 (si:dkey-199f5.8)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    130187941 (si:dkey-199f5.8)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:pswi01003]
    130187941 (si:dkey-199f5.8)
Enzymes [BR:pswi01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     130187941 (si:dkey-199f5.8)
    2.4.1.90  N-acetyllactosamine synthase
     130187941 (si:dkey-199f5.8)
Glycosyltransferases [BR:pswi01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   130187941 (si:dkey-199f5.8)
  Glycolipid
   130187941 (si:dkey-199f5.8)
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 130187941
NCBI-ProteinID: XP_056261912
LinkDB
Position
22:complement(3023623..3039627)
AA seq 399 aa
MISIQSKWRYLFMFLGIQLVVMALLSREGYQKRVSYFIRIFRKPDATSSSGRNHTAAVIG
GGDVYANLSHLSKTHSQGDEMPYCPKTSPLIGGPIHVSFPSGLTTAQVQRKNPLVVRGGR
YRPPDCEARHRTAIIIPHRHREHHLKFLLYYLHPFLQRQQLNYGIYIIHQAGNYTFNRAK
LMNVGFREAMREEDWDCLFFHDVDLIPEDDRNTYVCDSNPKHAAIAMDKFGYKLPYKMYF
GGVSALTPLHYLKINGFPNNYWGWGGEDDDIGIRVTLGGMYITRPSVKVGRYKMIKHKLD
KGNGVNPKRFNMLAKTRQTWRLDGMNTAEYETISRQYLPLYTNITVNIGTEAGLHPPPPP
PPAKAAVEKTAQAPAKGSAQPPATLEESHAENASATSDR
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgatcagcatccagtccaaatggcgctaccttttcatgttcctgggcattcagctggtg
gtcatggcgctgctgtcccgagagggataccagaagagggtctcctacttcatccgcatc
ttccgaaagcccgacgccacgagttcgtcaggccgcaaccacacggcggcggtcatcggc
ggcggggacgtgtacgccaacctctcccacctatccaaaacccacagccagggagatgaa
atgccttactgccctaagacgtcccctcttattggtgggccgatccacgtcagctttccg
tcggggctcacgaccgcacaggttcagaggaaaaaccccttggtggtgcgaggaggacgc
tacaggccgcccgactgcgaggcgaggcaccggacggccatcatcatcccccacagacac
cgagaacaccacctgaagttcctgctgtactacctgcatccttttctccagcgacagcag
ctcaactatggaatttacatcattcaccaggcggggaactacactttcaacagggccaag
ctgatgaatgtgggtttccgggaggccatgagggaggaagactgggactgcctcttcttc
cacgacgtggacctcatccccgaggacgatcgcaacacgtacgtctgcgactccaacccc
aagcacgccgccatcgccatggacaagttcggctacaagcttccgtacaagatgtacttt
ggaggcgtgtcggctctgacgccgctgcactacctcaagatcaacggctttcccaacaac
tactggggttggggtggagaggacgacgacattgggatcagagtgaccctgggggggatg
tacatcactcgtccatcggtgaaagtcggtcgctacaagatgataaaacacaagctggac
aaaggcaacggcgtgaacccaaagaggttcaacatgctggccaagacgcggcagacctgg
aggctggacgggatgaacacggccgaatacgagacgatctcccggcagtacctgcctctt
tacaccaacatcaccgtgaacatcggcaccgaggccggtctgcatccgccgccgccgccg
cctcctgccaaagctgcagtggaaaaaactgcccaggccccagcgaaaggatccgcccaa
ccgcctgccactctcgaagagagccacgcggagaacgcgtccgccacgagtgaccgctaa

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