Pseudoliparis swirei (Mariana hadal snailfish): 130189664
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Entry
130189664 CDS
T09868
Symbol
glb1
Name
(RefSeq) beta-galactosidase isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00052
Galactose metabolism
pswi00511
Other glycan degradation
pswi00531
Glycosaminoglycan degradation
pswi00600
Sphingolipid metabolism
pswi00604
Glycosphingolipid biosynthesis - ganglio series
pswi01100
Metabolic pathways
pswi04142
Lysosome
Module
pswi_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
130189664 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
130189664 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
130189664 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
130189664 (glb1)
00511 Other glycan degradation
130189664 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130189664 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130189664 (glb1)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
130189664 (glb1)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130189664 (glb1)
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
130189664
NCBI-ProteinID:
XP_056264558
LinkDB
All DBs
Position
24:10945040..10952757
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AA seq
647 aa
AA seq
DB search
MFIRFGSMLLLLQFGHSLGAPGSFSLDYQKDCFRKDGEEFRYISGSIHYSRIPRVYWKDR
LLKMYMAGLNAIQTYIPWNYHEDISGRYNFIGDRDLEYFLQLAQDIGLVVILRPGPYICA
EWEMGGLPAWLLNKKDIVLRSSDPDYITAVDKWMGKLLPMMKPFLYQNGGPIITVQVENE
YGSYFACDYNYMRHLTKLFRYHLGEEVVLFTTDGAGLSYLKCGSIQGLYATVDFGPGSNV
TAAFDAQRHVEPHGPLVNSEFYTGWLDHWGSGHSVVSSAIVAKSLSEMLALGANVNLYMF
IGGTNFGYWNGANNPYGAQPTSYDYDAPLTEAGDLTEKYFAIQEVIKMYHKIPAGPIPPT
TPKYAYGTVGMNKLQTLSDALEILSLSGPVKSKYPQTFIELNQAFGYVLYRTTLPVNCNT
PTPLSSPLNGVHDRAYVSVDGVAVGILERNKVITINVTGKAGSQVDLLVENMGRINYGKN
INDFKGLVSNMTLGKDTLTGWTMYSLSIDDAVSQGRLGETKPTDPPPPPALSLPAFYKGS
FIIPDGIPDLPQDTYIKLPKWNKGQIWINGFNLGRYWPTRGPQVTLFVPANILSTTAPNN
VTVLELEEAPCSSGPCSVEFTATPILNATVQSDYERERRLFIKDDLL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcagattcggaagcatgctgttgctgttgcagttcggacattcactcggggcc
cctggttcattcagcctggattaccagaaggactgctttcggaaagatggagaagagttt
cgatacatatcaggaagcatccattacagccggatcccccgagtctactggaaggaccga
ctgctcaagatgtacatggcaggactgaatgccatccagacgtacattccctggaactac
cacgaagacatttcgggccggtacaattttattggagacagggatttggaatatttcctt
cagctggctcaagacataggtttagtggtcatccttcggcctggaccctacatatgtgca
gagtgggaaatgggtgggttgcctgcttggctactcaacaagaaagacattgtgctgcgc
tcctcagatccagattacatcacagcagtagataagtggatggggaagttactgccaatg
atgaagccttttctctaccagaacggtggtccgatcatcactgttcaggtggagaatgaa
tacggcagttattttgcctgtgactacaactacatgcgccaccttacgaagctgttccgg
tatcaccttggtgaggaggtggtgctcttcaccacagatggagctgggctcagctacctc
aagtgtggctcaatacaaggtctctacgctactgttgactttgggccaggttccaatgta
accgctgcctttgatgcacagagacacgttgaacctcatggacctttggtgaactctgag
ttttacactggctggctggatcactgggggtccggacactctgtcgtgtcgtctgccatc
gtggccaagtccctcagcgagatgctcgctctgggagccaacgtcaacctatacatgttc
ataggaggaacaaactttggatactggaatggtgccaacaatccatacggcgcgcagccc
acaagctacgactacgacgccccgctcacggaagcaggagaccttacggagaagtacttt
gctattcaagaggtgatcaaaatgtaccacaagataccagcgggaccaataccacccaca
actccaaagtacgcatatgggactgttgggatgaacaagctccagacgctatcagatgcc
ttagaaatactgtctctctctggccctgtcaaaagcaaatatcctcagactttcattgaa
ctgaaccaggcatttggttatgtgctctacaggaccactctacctgttaactgcaacaca
ccaactccactgtcatctccgctgaacggcgtccatgatagagcgtatgtgtccgtggac
ggggtggctgtggggattcttgaaagaaataaagtcataactatcaatgtgactgggaaa
gctggcagtcaggtggacttactggtggagaatatgggacgaatcaactacggaaagaac
attaatgactttaagggcctggtgtccaacatgactctggggaaggatacgctcactggc
tggaccatgtacagcctcagcatcgatgatgcagtcagtcagggtcgtctcggtgaaacg
aaaccaacagacccaccaccgcctcctgctctctccctgccagccttctacaagggaagc
ttcatcattcctgacggcatcccagatctccctcaggacacctacatcaagcttcccaaa
tggaataaggggcaaatttggattaacggcttcaacctcggacgttactggccaacccga
ggccctcaggtgactctttttgtacctgcaaacatcctcagcaccactgcaccgaacaat
gtgactgtcctggagctggaagaggctccctgcagctcagggccatgcagtgtggagttt
actgccacccccatcctgaatgcaacagtccagtctgactacgaacgggaaaggaggctt
ttcattaaagatgatttgttgtga
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