Pseudoliparis swirei (Mariana hadal snailfish): 130190785
Help
Entry
130190785 CDS
T09868
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04020
Calcium signaling pathway
pswi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130190785 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130190785 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130190785 (grin2bb)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Glutamate (ionotropic)
130190785 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
130190785
NCBI-ProteinID:
XP_056266369
LinkDB
All DBs
Position
24:complement(17463976..17502564)
Genome browser
AA seq
1308 aa
AA seq
DB search
MNVTFEGRNLSFSEEGHQMFPKLVIILLDKDRQWDRVGKWERGSLTMRYHVWPRFELYSA
AEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLSNQTGDSGIYIKRCCK
GFCIDILKKIAKAVKFSYDLYLVTNGKHGKKVNGTWNGLVGEVLRKNAHMAVGSLTINEE
RSQVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLMVSAVSVFVFE
YFSPVGYNRCLADGREPGGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF
AVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQNPNEFSPPFRFGTVPNGSTERNIRNN
YKDMHTYMTSFHQKNVDEALYSLKNGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFA
STGYGIAIQKNSSWKRAVDLAILMLFGDRDMEEFEALWLTGICHNEKNEVMSSQLDVDNM
AGVFYMLAAAMILSLLTFICEHWFYWQLRFFFMGVCSGQPGATFSISRGIYSCIHGVQIE
ENKSSKDSPSATMKKNMNNTHSNILRLLRTAKDMTAVPGINGSPHAALEYSHSGRDSTSY
DVQEHRRSLVGHPADCKSAPPYLPEDNMFSDYISEVERTFGNLPLKDSNLYQDHYLHHHP
ASALGMSGPPPNRPRSLGSSSSVEGGMFDCDSLGGGVAPIFTTQPRPSMTHRNTNKFDLI
AGHTPADSSQGGFKGNNVFGRFSFKGGASSTGLIGGHDRYCGGRGGGSGGDDGNIRSDVS
DISTHTVTYGNLEGNNKRRKQYRDSLKKRPASAKCRREQDEIELSGLRRRAHHHTVHHHF
PHGPLAHRTVSPPLGRKRGGGGGNSSPYLFRKDKENLRDFYADQLRSKEGKAKWEQEGGS
GGSGVGGGSGGGICKSLIPVEDFLKGKGKNPECKGGLGSVSAGQQAHTCWEQGLSGLGGG
GIAGGDWECRNCHNVCHQGGGGPCPASGVGGSSSRPSSASCKHSDSCQISQSNLYNISED
LNMAYAGVKSSVGPSQAQTQAQRRKIGPGGRVLRRQHSYDTFVDLQREGAGRRGGGGGKS
PQPRSVSLKDKDRFMEGPSPYAHIFERYLGERESSIFGGVGEDRTKGGSSFSLFRGSEGG
LHQRSVGERDLRDRDRALMGGGGCGAGGSSRGAGTYSLSKSLYPDKVNQNPFIPTFGDDQ
CQLHGAQPYYVKKPQTQQQQQQLLNNSRGGGDFHGSMGTTSYLPNVAPRFPKELCLSGVG
VPMGNHHGASKLLPVGRDTLGLGPGQRAFNGASNGHVYEKLSSIESDV
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacatttgaaggccgtaacctgtcatttagcgaagagggtcaccagatgttc
cccaaactggtaatcattcttctagacaaggacagacagtgggacagggttggcaagtgg
gagagaggctctctgacgatgagataccatgtgtggcctcgctttgagctgtactctgcg
gcggaggagcgggaggatcacctgtccatcgtgactctagaggaagcgccgtttgtcatc
gtggaggacgtggacccactcagtggcacctgcatgaggaacaccgtgccgtgccgcaaa
cagctcaaactcagcaatcagactggcgattcagggatttacatcaagcgctgctgcaaa
gggttctgcattgacatcctgaagaagatcgccaaggcggtgaagttctcttacgacctc
tacctggtcaccaacggcaagcacggcaagaaggtcaatgggacgtggaacggcctggtt
ggtgaggtgttgcggaagaacgcccacatggcagtgggttcgctcaccatcaacgaggag
aggtcccaggtcgttgacttctccgtgcccttcatcgagacggggatcagtgtcatggtc
tcccgtagcaacggcaccgtgtccccctccgctttcctcgagcccttcagtgctgatgtc
tgggtgatgatgtttgtgatgttgctgatggtgtcggccgtgtctgtgtttgtgtttgag
tacttcagtcccgtgggttacaaccgctgcctggcagatggacgagaacccgggggcccc
tccttcaccatcggcaaggccgtctggctgctttggggtctggttttcaacaactccgtc
cccgtgcagaatcccaaagggaccaccagtaagatcatggtgtcagtgtgggccttcttc
gctgtcatcttcctggcctcctacactgccaacctggcggccttcatgatccaggaggag
tacgtcgaccaggtgtcgggcctgtcggataaaaagttccagaatcccaacgaattctct
ccgcctttccggtttggcacggtgcccaacgggagcacagagcgcaacatccgcaacaac
tacaaggacatgcacacttacatgaccagcttccaccagaagaatgtagacgaggcgctg
tacagtctgaagaacggcaagctggatgccttcatctacgacgcggcggtgctgaactac
atggccggccgggacgagggctgtaagctggtcaccatcgggagcggcaaggtgttcgcc
tccaccggctacggcatcgccatccagaagaactccagctggaaacgagccgtggatctg
gccatcctcatgctgtttggagatcgtgatatggaggaatttgaggctctgtggctgacg
ggcatctgccacaacgagaagaacgaggtgatgagcagccagctggacgtggacaacatg
gcgggggtcttctacatgctcgctgccgccatgatcctgtcgctgctcactttcatctgt
gaacattggttctactggcagctgcgcttcttcttcatgggcgtgtgctcggggcagccc
ggggctaccttctccattagcaggggtatctacagctgcatccatggggtacaaattgag
gaaaataaatccagcaaagactcgccctcggccaccatgaagaagaacatgaacaacacc
cactccaacatcctgcgcttgctccgcactgccaaggacatgaccgccgtcccgggcatt
aacggctcgccgcacgccgccctggagtacagccacagcggccgggactcgaccagctac
gatgtccaggagcaccggcgcagcctggtgggccaccccgccgactgcaagtcagcgccg
ccctacctgccagaggacaacatgttcagtgactacatcagcgaggtggagaggactttt
ggcaacttgcccctgaaggacagcaacctgtaccaggaccattacctgcaccaccacccg
gcctcggctctgggtatgtccggcccaccgcctaacaggccgcgtagcttaggcagcagt
agctcggtggaggggggcatgttcgattgcgacagtttagggggaggggtagcgcccatc
ttcaccacccagccccgtccctccatgactcacaggaataccaataagtttgacctgatc
gctggccacacccctgcggattccagccagggtgggttcaagggaaacaatgtgtttggc
aggttttctttcaaaggaggtgcatccagcacggggctcatcgggggtcacgacaggtac
tgtggtgggcgcgggggaggctcagggggggatgatgggaacattcgctcggatgtctcg
gatatatccacgcacactgtcacctacggcaacctggagggcaacaacaagcggcgtaag
cagtacagggacagcctcaaaaagaggccagcttcggccaagtgcagacgggagcaggac
gaaatagagctgagcggccttcggaggagagcccaccaccacaccgtccaccaccacttc
ccccacgggcccctggcacaccgcacggtctcacctcccctggggcggaagaggggaggc
ggagggggtaattcttcaccttacttgttccgcaaagacaaagagaacctgagggatttc
tatgcggaccagttgcgctccaaggaaggcaaggccaagtgggagcaagagggtggaagt
ggaggaagcggcgtgggcggtggaagtggtggtggtatctgtaaaagcttaatacctgtg
gaagacttcctcaaaggtaaaggcaagaatccggagtgtaaaggtgggcttggctcagtg
tcggcagggcagcaggcccacacctgctgggagcaggggctttctgggctgggaggtggg
ggcatagcagggggcgactgggaatgtcgaaactgccataatgtgtgtcaccaaggtgga
ggcggcccttgcccggctagcggggttggcggcagcagcagtcgccccagctccgctagc
tgcaagcacagcgactcgtgtcagatctcgcagagcaacctttacaacatcagcgaggat
ctcaacatggcgtacgccggagtgaagagtagcgtcggacccagccaagcacagactcag
gcgcagcgcaggaagataggcccgggcgggagggtgttacggaggcagcactcatatgac
acgtttgtggacctgcagagagagggggcgggccgccggggagggggcgggggaaagtct
ccccagccgcggagcgtgagcttgaaagacaaagaccgcttcatggagggccccagccct
tacgctcacatattcgagaggtacctaggggaaagagagtcttccatatttgggggagta
ggcgaggacaggacgaagggaggctcctccttcagtttgttccgtggaagcgaaggtggg
ttgcatcagcggtccgtgggggagagagacctgagggacagagatagagctttgatggga
ggtgggggctgtggtgctggtggtagcagcagaggggccgggacttactccttgtctaaa
tctctctacccagataaggtgaaccagaaccccttcatcccaaccttcggcgacgaccag
tgtcaattacacggcgcccaaccgtactacgtcaaaaagccacagacgcagcagcagcag
caacagcttctcaacaacagccgaggaggaggggacttccacggctccatgggaacgact
tcctatttgcccaatgtggcccccaggttccctaaagagctgtgtctgagcggggtgggg
gtgcccatggggaaccaccacggggccagcaagctactgccggtgggcagggacacgtta
ggcctggggccgggacagagagccttcaacggtgccagcaacggacacgtttacgaaaag
ctctccagcattgaatcagacgtctga
DBGET
integrated database retrieval system
