Pseudoliparis swirei (Mariana hadal snailfish): 130193436
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Entry
130193436 CDS
T09868
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pswi01100
Metabolic pathways
Module
pswi_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
pswi_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
130193436
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130193436
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
130193436
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
130193436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
130193436
NCBI-ProteinID:
XP_056269843
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Position
5:complement(15060596..15073854)
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AA seq
398 aa
AA seq
DB search
MFMNFRRIRKCQCMQLLTTGLVLCVVMVCWEELDHHVVSHMRSYTYRYLVNSYDFLNSSY
ALSSSRHNKDGYYDVDSGLGNYPYLMNHPGKCGGGGGDGKSRDDVLLLLFVKSSPENFER
RQAIRDTWGNESFVWSELGASVRLVFALGVHPDVGWRSRVQSALLQEDQAYGDLIQQNFL
DTFHNLTSKLILQFRWGYKYCRQARFLMSADDDIFVHMPNLVKYLQELLHSQSMAKDLWV
GHVHRGAPPVRRKESKYHVPHDLYPWPAYPDYTAGAGYVVSADVAAKIYLATLLLNSSMY
IDDVFMGICAKTMGVSPQEHVYFSGEGKTPYHPCIYNHMITSHGHATDVRSLWQAATDPT
VSGNSRGLINNIYCTSVRVALLCLPYYQNTYSCMAAFT
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgaacttccgtcgcatccgcaagtgccagtgcatgcagctgctgaccacaggt
ctggttctgtgtgtggtgatggtctgctgggaggagctggaccaccatgtggtcagccac
atgagatcctacacctaccgctacctggtcaacagctacgactttctcaattcctcctac
gccctcagctccagccgtcacaacaaggacggttattatgatgtggacagtgggttgggg
aactatccgtacctcatgaaccacccgggcaaatgtggaggtggcggcggagacgggaaa
agccgggatgatgtcctcctgctgctttttgtaaaatcctcgccggagaactttgagcgc
cggcaggccatcagggacacgtggggcaacgagagcttcgtttggtccgaactgggggcg
agcgtgaggctggtgtttgccctcggcgtgcacccggacgtcgggtggagatccagggtg
cagagtgcgctgctgcaggaggaccaggcctacggcgacctgatccagcagaacttcttg
gacaccttccacaacctgacttccaaactgatcctgcagttccgctggggctacaagtac
tgccgtcaggcacgcttcctcatgtctgcggatgatgacatcttcgtccacatgccaaat
ttggtgaagtacctgcaggagctcctgcatagtcaatcaatggccaaagacctgtgggtg
ggacatgtgcacagaggagcccctccagttcgccgtaaagagagcaaataccacgttccc
catgatctgtacccctggcccgcctacccagactacactgctggagcgggctatgtggtc
tcagcggatgtggccgccaagatctaccttgcaactctgttgctgaactcctccatgtac
atcgatgacgtcttcatggggatttgtgctaagaccatgggggtctctccccaggagcat
gtctacttttcaggggagggcaagactccgtaccacccttgcatctataatcacatgatc
acgtcacacggccacgccacggatgtgcgctcactatggcaggccgcaacagacccgaca
gtctctggtaactcccgaggattgataaataatatttactgcacatcagtgagagtggcg
ctgctgtgtctgccttattaccagaacacctactcctgtatggccgctttcacatga
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