Pseudoliparis swirei (Mariana hadal snailfish): 130194305
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Entry
130194305 CDS
T09868
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130194305 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130194305 (tprb)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130194305 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
130194305
NCBI-ProteinID:
XP_056271229
LinkDB
All DBs
Position
5:1453038..1483657
Genome browser
AA seq
2348 aa
AA seq
DB search
MAALLLQELEPSELSKIPKTVQNKLERLLSDQLYEIDYVKAQQEQFRVDSEQQFFEKVKQ
LSQSQEDYLSQNQEHLQLKEEFKEQEEDLKSVREKNGEYESSHARLSSEQILLAKAKEEL
ETEKRELVRTLERRSLEVEHLNDDFRQLNDKMVEVNTSKMALQMKLDELESAEVNIKYKE
KRMNQEKELLNNQTTWLNHELQAKSEELLALSRQKGNDILELKCKLENKEDELNRQQDQL
ASFKNSNENLQKRNEDVIGTLKEAKEQQATVEEKFRNELNANIKLSNLYKGASADSEAKS
TELSGAVEELHKLLKDAGEANKALEETLQEMNGATDQSVAELKERVRALEKELDDANELL
SSAKLRGPLGITSLIAEEQMTTMSPTAATVSKIKPGMKLTELYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVVSLSAKLEQAVKEVHRLQKEADEAN
KRSSVLERDNQRCELQLGDMAQQVRVLLIELEEARGNYVIHEEEEVSSADVSSTSEVISQ
HLVTFRGVEELQKQNQRLLVALRELSDAQEKEELEASGDKRGELEQRFDKAKLELETLNE
QRSEQVKVTESIVRQRDLYRVLLAQATGVSFPQQGAQPEEFTLTSTPRCSPAAIPTAGTP
TSLVSMGKESSEALEAKAALQQLQEVFSAYKKERMECNKATAEQNEKLQEQLSDLHAQNS
KISTQLEFASKRYEMLQDNVERYRKEIASLREKGQKMAAAAQRHEQTSHTLNEDLKAARE
KLTMAEGRAESLRKERDLLKLVESQLNQERESILSHQQSQSLLMANLQAIQATLERSEAE
THRRLNGQVEKQEREISQLQKRLEHEVEQRHLLSRNQEIQLMEVKRQLELQVPTHQRTKE
LLSGAELELNTLRLQLGSSERRHSLSSPPTTSARGLLPGSDHDREDLQGRLRLAESRSLE
LAESLRVATASVDQYRAMAQSLEESLDKEKQVTEQARSSIEARMKEAERQHRRLEEKLLE
AEKDKLSTEEQKKRALASLEEQMSSLRRRLCSAQADHQAALQQVNVAEAQQQQALQDSRE
QAKLAFEAQDKYEREMILHAADVKALQAATAQATQAAELRHQLDERAQRVGAELLEARVS
WEEQEKILKEEMSKMEIRSEELQRQNTLLHEQIQTMSSKMADKLQQAVSESPLNISLTEE
GKSQDQVLEILRFVRREKEISESRFEVAQGESLRYRLRVEHLERELKEVQDSLSAAKERM
QVVTAKTLAQHDELMKKTETMSILMETNKMLREERDKLEQELHQTQAKVQKLESDIMPLQ
QANSELSEKSGMLQAEKKILEEEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEANLKRI
LQLTEESTRLKAEVARTYILTTSLQSQMQNMSKITEERNKLKKEAETKNQELQEKVKTIT
QVKKIGRRYKMQYDELKLEHDKLVAEAAAGPSQEEEARQASVQELQSLRDALSQTEAKTR
ELEGQLETSSKAAAERETEGRGAQEQSIRLQAELARLRQELHDKASHEDTLRQQMTDKED
KTRKAIVYAKQKINQLTSSKDQLHKENEELKQQREELEVRVGALKSQFEGRLSRQERELR
DLRGQQERQEQRDEPPEAGPCKTQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIKP
TPVATSSKQPVNPGNKPPPRASIRPMITPATVPTPTPTATVMPTTQAETQEAMQSTEGPP
VEHVTVYGSGSVRSASPNVQNTLTSAMLTGQQTQTTAFVQPTQQQSVSHAEPANQEPPPP
MVIEATPSSQVEWPSTSSSVFGTVSATPGMSSMSKRPREEEEESAATLVTDTESAQEDSA
RAPIPKKLRIVQRVGPEEEVLVEDSAEAVVLTDSQDRAEASQTEDFPVLEEGDDGSASQS
IMIYQEVTLTQSDSPHQLQQEVIVIVTDTESDDEEDEEEEEEPDYEEEEEEEEEEDEEDE
EEDDGEMEEGEDSNEGSGDGNEAYEEDEAEGADVTDLGTETEESLGASDSTQRPADSQTG
FDGSMEASYAAEQPISSSGSRLPQSPRRPTHLLPPRLNIAPTSELGPPAQVQRIPVRRQS
VGRVPTLTPGVPVSSHFFDDDDRMVPSTPTLVLPQRSDGFDQTIHSPQVAGVPRFRFGLS
DDVPQTSSSSSSHSDLGQLASHGGLGMYESPLFLATHEEESGGRTVPTTPSQVSAPVTIF
SEAAQSDAPGDHASQSVPMVSTSTPGPGAGGATEDDVFLEPDADRSSAEVLLDPVASQGD
SEDPGHQPACLPSTSQEPSSSSADTSSAAPSRPGSSRQLQRWPEHRGGRMKRGGGFPSRG
VHGRRFAR
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaggagttggagccttccgagctatcaaagataccaaaaacc
gttcagaacaaactcgagaggcttttgtcggaccagctctatgaaatagattatgtaaaa
gcacaacaggaacaatttcgcgttgacagcgaacaacaattctttgaaaaggtgaaacaa
ctctctcagagtcaagaagactatttgtcccagaatcaagaacatcttcaactcaaagag
gagtttaaagagcaagaggaagatcttaaaagtgtgcgtgagaagaatggagaatatgaa
tcctctcacgcgaggctgtcatctgagcagattttgctggcaaaggccaaagaagaactg
gagaccgaaaagcgagaacttgtgcgaactctggagaggaggtccttggaagtggagcat
ttaaatgatgacttcaggcaactcaatgacaagatggtggaggtcaacacctccaagatg
gccctccagatgaagttggatgaacttgaatcggctgaagtcaacatcaaatacaaggag
aagcgtatgaatcaggagaaggagctgctgaacaaccagaccacttggctcaaccacgag
ttgcaagcgaagagcgaggagctgctggccctctcccggcagaagggcaacgacatcctg
gagctgaaatgcaagctggagaacaaggaagacgagttgaaccgacaacaagaccaattg
gcaagtttcaagaattcaaacgagaaccttcagaaacgcaacgaggacgtgatcggcaca
ttgaaagaagccaaagaacaacaagccaccgtggaggagaagttcagaaacgagctgaac
gctaacatcaagctttccaatctatacaagggagcgtcggcggattctgaggcaaagagt
accgagctgagtggcgccgtggaggagctgcacaagctgctgaaagacgccggagaagcc
aacaaggccctggaagagacgctgcaggagatgaacggcgccacggaccagagcgtggcc
gagctgaaggagagggtccgcgctctggagaaggagctggacgacgccaacgagctgctg
tccagcgccaaactcagaggccctcttggcatcacgtctctgatcgcagaggagcaaatg
acgacgatgtctccaacggcggcgactgtatccaagataaagcccggcatgaagctgacg
gagctgtacacggcgtacgtggagagccaggagcagctgcagttggagcgactggagaac
aagcgagtcaacaagtacctggacgacatcgtgcaggaggtggaggccaaagcgccgatc
ctcaagcggcagagggacgagcacgagcgcatgcagaagtcggtggtcagtctgtccgcc
aagctggagcaggctgtgaaggaggtgcatcgtctacagaaggaagccgacgaagccaac
aagcgctcctccgtactggagagggacaaccagaggtgcgagctgcagctgggagacatg
gcgcaacaggtgcgtgtgctgctgatcgagctggaagaggctcgcgggaactacgtgatc
cacgaggaggaggaggtgagctcggccgacgtcagcagcacatcggaggtgatcagccaa
cacctggtgaccttccgcggcgtcgaggagctccagaagcagaaccagcgcctcctggtg
gccctcagggagctgagcgacgcccaggagaaggaggagcttgaggcctcgggcgataag
cgtggtgaactggagcagcgctttgacaaagccaagctggagctggagaccctgaacgag
cagcgcagcgagcaggtgaaggtcaccgagtccatcgtgaggcagagggacttgtaccgg
gtgctgctggctcaggccaccggagtcagcttccctcagcagggtgcacaacccgaggag
ttcaccctgacctccaccccccggtgctcacctgcagccattcccaccgcgggaacgccc
acttccctcgtgtccatggggaaggagtcttccgaagccttggaggccaaggcggctttg
caacagttgcaagaagtgttttctgcctacaagaaggagcgcatggagtgtaacaaggcc
acggcggagcagaacgagaagctccaggagcagctctctgacctccacgcccagaactct
aagatatccacccagctcgagtttgcctcgaagaggtacgagatgcttcaggacaacgtg
gagcgctacaggaaagagatcgcctccctcagagagaaaggccagaagatggccgccgcc
gcacagaggcacgagcagaccagccacactctgaacgaggatctgaaggctgcccgagag
aagctcaccatggctgagggccgcgccgagagtctccggaaggagagggacctgctgaag
ctcgtggagtctcaactgaaccaggagagggagtccatcctgagccaccaacagagccag
agcctgctgatggccaacctccaggcaattcaggccactctcgagcgctcggaggccgag
acgcaccgacgtctgaacggccaggtggagaagcaggaacgagagatctcccagctgcag
aagaggctggagcacgaggtggagcagcgccacctgctcagcaggaaccaggaaatccag
ttgatggaggtaaagaggcagctggagctgcaggttccgacccaccagaggaccaaagag
ctgctgagcggcgccgagctggagctcaacaccctccggctgcagctgggcagcagcgag
cggcgccacagcctgagctccccccccacaaccagcgccagaggcctgctgccggggtct
gatcacgaccgcgaggacctgcagggccgcctgcggctcgccgagtcccggtccttggag
ctggcggagagcctccgggtggccacggccagcgtggatcagtaccgggccatggcccag
agcctggaggagtccctggacaaagagaaacaggtaacggagcaggcgcgctcgtccatc
gaggctcgcatgaaggaggccgagcggcagcaccgccggctggaggagaagcttctggag
gcggagaaggataaactctccacggaggagcagaagaagagagccctggcctccctcgag
gaacagatgagcagcctgaggaggagactctgcagcgctcaggccgaccaccaggcggcg
ctgcagcaggtcaacgtggctgaagcccagcagcagcaggcgctgcaggacagccgagag
caggctaagctggcgtttgaagcgcaagacaagtacgagcgtgagatgatcctgcacgcg
gccgacgtgaaggccctgcaggccgccacggctcaggccacgcaggccgcggagctccga
caccagctggacgagagagcccagcgggtcggcgccgagctgctggaggcccgggtctcc
tgggaggagcaggaaaagatcctgaaggaggagatgtcaaagatggagatccgctccgag
gagctgcagaggcagaacaccctcctgcacgagcagatccagaccatgagcagcaagatg
gccgacaagttgcagcaggcggtcagcgagagtccgttgaacatctccctgaccgaggag
ggcaagtctcaagaccaggtcctggagattctcaggtttgtgcgtcgagagaaagagatt
tctgagtctcgcttcgaggtcgcccaaggggagagtctgcgttaccgtctgcgggtggag
catctggagcgagagctgaaggaggtgcaggacagcttgagtgctgcgaaggagaggatg
caggtggtgacggcgaagacactggctcagcacgacgagctgatgaagaagactgagacg
atgagcatcctgatggagaccaacaagatgctgcgtgaggagagggacaagctggagcaa
gagctgcaccaaacccaagctaaggtacaaaagctggagtccgacatcatgccgctgcag
caggccaactccgagctgagcgagaagagcggcatgctgcaggcggagaagaagatcctc
gaggaggagatcaagcgctggaaggctcggacccagcatttggtgagccagcaaaaggat
tctgaccccgaggagtacaagcgtctgcactctgagaaggaggccaacctgaaacgcatc
ctgcagctcactgaggagagcaccaggctcaaagcagaggtggccaggacctatattctc
acgacgtctctgcaaagccagatgcagaatatgagtaagataaccgaggagaggaacaag
ctgaagaaggaagcggaaaccaagaaccaggaactccaggagaaagtgaagaccatcact
caggtgaagaagattggacgccgctacaagatgcagtacgatgaactcaagttggagcac
gacaagctggtagccgaggcggcggcgggcccgtcccaagaagaagaggctcgccaagcc
tcggtccaggagctgcagagcctccgagacgctctgagccagacggaggccaagaccaga
gagctggaggggcagctggagaccagcagcaaggcggctgcagagcgtgagactgaaggc
cgtggcgcccaggagcagtcgatccggctgcaggcggagctcgccaggctgaggcaggag
ctgcacgacaaggcgtctcacgaggacacgctgaggcagcagatgaccgacaaggaggac
aagaccaggaaggccatcgtctacgccaagcagaagatcaaccagctcacaagctccaaa
gaccagctgcacaaggaaaacgaggagctgaagcagcagcgcgaggagctggaggtgcga
gtgggcgctctgaagtctcagttcgaaggtcgcctgagtcgccaggagagggaactgaga
gacctgaggggtcagcaggagaggcaggagcagagggacgagccaccggaggccgggccc
tgcaagacccaggagcagcagaggagtaccgagcagaggcagatcagcctgaagacgacc
ccggcggcagacagggggagcgccagcacatccgagccgcccaccgccaacattaagccg
acgcccgtggcgacgtcgagcaagcagcccgtgaacccgggcaacaagccccccccgagg
gcgagcatccggcccatgatcaccccggccaccgtccccaccccgacccccaccgccacc
gtcatgcccaccacgcaggcggagacccaagaagccatgcagtccaccgagggcccgccg
gtggagcacgtgaccgtgtacggcagcggctcggttcgctccgccagccccaacgtccag
aacacgctgaccagcgccatgctgacggggcagcagacgcagaccacggcgttcgtccag
cccacgcagcagcagagcgtgagccacgcggagccggccaatcaggagccgccgccgccc
atggtcatcgaggcgacgcccagctcgcaggtggaatggccctcgacgtcttcctcggtg
tttggaactgtttcggcaacgccaggaatgtcctccatgtccaagaggcctcgtgaggag
gaggaggagagcgccgccaccctggtcaccgacacggagtccgcccaggaggacagcgcc
agggctccgatccccaagaagctgcgtatcgtacagagagtgggtccagaggaggaggtg
ctggtggaggacagtgctgaggcggtggtgctaacagacagtcaagatcgtgcagaagca
agccagacggaggacttcccggtcctggaggagggagatgacggttcagcctcccagtcc
atcatgatataccaagaggtcaccctgacccagagtgactctcctcaccagttgcagcag
gaggtcatcgtcatagtgacggacacggagagtgacgatgaagaggatgaggaagaagaa
gaggagccggactatgaagaggaagaagaagaggaggaggaggaagacgaagaggacgag
gaggaagacgacggagagatggaggaaggagaagacagcaacgagggaagcggagacggc
aatgaggcctacgaggaagacgaagcagagggcgctgacgtcaccgacctgggcacggag
acggaggagagtctgggggcgtccgactctacccagcggccggccgactcccagaccggc
ttcgacggctcgatggaggcgtcgtacgctgcggagcagccaatcagcagctccggttcc
cggttgcctcagtcgccacggagaccgacacacctgctgcccccccgcctgaacatcgcc
ccgacgtcagagcttggaccgcccgctcaggttcagcgtatcccagtgcgtcgccagtcg
gtcggcagagtcccgacgctcacccccggggtgccggtcagttcccacttctttgatgac
gatgaccggatggttcccagcacgccgactctggtgctgccgcagcgctccgacgggttc
gaccagacgatccattctccccaggtagccggcgtgcctcgcttcaggttcggtctctcg
gacgacgttcctcagacctcctcttcctcttcctcgcactcggacctgggacagctggcc
tcgcacggaggcctcgggatgtacgaaagcccgttgttcctggcgacgcacgaagaggag
tcgggcggacgcaccgtccccaccacgccgtctcaggtgtcggctccagtaaccatcttc
tcggaggcggctcagtccgacgcccccggtgaccacgcctcccagtcggttcccatggtg
agcacgtccacgccgggcccgggagcgggcggcgccacggaggacgacgtcttcctggag
cccgacgccgaccggtccagtgctgaggtgctgttggacccggtggcctctcagggggac
tctgaggacccgggccaccagccggcctgcctcccctccaccagccaggagccgtcctcc
agctctgcagacaccagcagtgcggcgccctccagacccggctccagccggcagctgcag
cgctggccggagcaccgcggggggcgcatgaagagaggaggtgggtttccttctcgagga
gttcacgggcgacgattcgccagatga
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integrated database retrieval system
